Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq458 134 2e-26 >seq458 Length=503182 Score = 134 bits (148), Expect = 2e-26 Identities = 184/256 (72%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 172399 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 172458 ||||| | |||||| |||| ||||||||||||||||| ||| ||||| || | ||||| Sbjct 280978 AAGAATTATTATGGTTTATAAAAGGTTCAACTGATTCGAAAAAATTATCCGAAAAAGGTG 280919 Query 172459 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 172518 | ||| ||||| ||| |||||||| |||||| | ||| || |||| ||| Sbjct 280918 TAAAAATTTGGGATGCAAATGGTTCAAAAGAATTTCTTGATAGTCTTGGTTTTATTGATC 280859 Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 172578 | ||||||||||| |||| || ||||||| ||||||||||||||| || || ||| Sbjct 280858 GTCAAGAAGGTGATCTAGGTCCTGTTTATGGTTTTCAATGGAGACATTTTGGTGCCGAAT 280799 Query 172579 ATATCGACTGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTA 172638 || || | | || ||||| | || ||||| | || ||||||| || ||| | Sbjct 280798 ATCGTGATAATCAAACTGATTATAATGGTCAAGGTATTGATCAATTAAAACAGCTTATAA 280739 Query 172639 ATACTTTACAAAACAA 172654 | || | |||||||| Sbjct 280738 AAACAAT-CAAAACAA 280724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632479148109360