Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq335 154 2e-31
seq768 138 2e-26
>seq335
Length=939964
Score = 154 bits (170), Expect = 2e-31
Identities = 233/327 (71%), Gaps = 11/327 (3%)
Strand=Plus/Minus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
||||||||||| ||||| ||||||||| || | ||| ||||||| ||||||||||||
Sbjct 900285 CCTTCGTCGCGCGAGATCAGTTCGTTGCTGAAACTGAGCCCGGGCAGCAGGCCGCGCTTC 900226
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|||||||| ||||| || || || ||| ||| |||||||| ||||| ||| |||
Sbjct 900225 TTGAGCCAGAAGATCGCGCAAAACGAGCCGCTGAACAAGATGCCTTCGACCGCGCAAAAC 900166
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520
||| || || || || | | || | ||| || |||||||||| | |||||||
Sbjct 900165 GCGAGCAGGCGTTCCGCGAGCGAGTTCGAGCC-----TG-TGATCCACTTGACCGCCCAC 900112
Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTG-TCGATGGCGC---GAAAGAGGTGGTCCTT 794576
|| ||||| | |||| |||| |||| ||||| |||| | || | | | |
Sbjct 900111 TCCGCCTTGCGTTTGACCGCCGGCA-CGTGCTCGATTGCGCGCAGCAACCGCAGCTTTTC 900053
Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636
||| || | | | || |||||||||||| || | ||| ||||| |||||||||||
Sbjct 900052 GTCGGCCTGCTGCGCGAGGTAGGTGTCGATCAGCAAGCTGTACGTCTCCGAGTGGATGTT 899993
Query 794637 TTCGATGGCGATCTGGAAGCCATAAAA 794663
||| || || | |||||| | |||||
Sbjct 899992 TTCCATCGCAACCTGGAACGCGTAAAA 899966
Score = 150 bits (166), Expect = 3e-30
Identities = 197/269 (73%), Gaps = 4/269 (1%)
Strand=Plus/Minus
Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596
|| ||||||||| |||||||| || |||| || ||||| ||||| ||||| | |||||
Sbjct 179076 GCCCTGGTCGACGTAGCGCGCGGTCGCGTTGAACACGCGCAGCATCGGCACGATCCCGTT 179017
Query 2073597 GGACT-CGCC-GTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCA 2073654
| || |||| ||| |||||||| | ||| ||| || ||||| | |||||| ||
Sbjct 179016 G--CTGCGCCCGTTCGTGCCCGCGATGTACGCGTTCGTCGCGCGGATCTTGTGGATCGCG 178959
Query 2073655 AAGCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATG 2073714
| ||||| ||||| || |||| ||| | |||||||| |||||||| ||| | |||
Sbjct 178958 AGCCCGATCCCGCCAGCGTACTTGCTGATCACCGCGCACTCCTTCAGCGTGTCGAAAATG 178899
Query 2073715 CCCTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCC 2073774
||||||||||||||| | ||| | || ||||||||| ||| || | ||| |
Sbjct 178898 CCCTCGATCGAGTCGTCGGCCATCTGCAGCAGAAAGCAGCTGGAGAGCTGTTGCCGCTTC 178839
Query 2073775 GTGCCGGCATTGAAGAGCGTGGGCGTCGC 2073803
||||| ||||| ||||| ||||||||
Sbjct 178838 AGCCCGGCGTTGAACAGCGTCGGCGTCGC 178810
Score = 140 bits (154), Expect = 5e-27
Identities = 124/155 (80%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 796177 AAGCGGCCGGCCAGGTTCTCAGCCACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACG 796236
||||||| ||| || ||||| ||||||||||||||| || |||||||| ||||| |||
Sbjct 899931 AAGCGGCTGGCGAGATTCTCGAGCACGATGCCGTCGCTCGCCGCGAAAAACGCGAGCACG 899872
Query 796237 TGCTTGATAAAGTGACGCTCGTCGTCGCTGAGCGAGACCCAGTGGACCGTGTCGGCGCCG 796296
|||||||| ||||| ||||| |||| | |||| | |||||| | || ||||||
Sbjct 899871 TGCTTGATGAAGTGCCGCTCACCGTCCTTCAGCGCGTCCCAGTCGTCCAAGTCGGCAGAC 899812
Query 796297 AGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTC 796331
||||| | ||||||||||||||||||||||| ||
Sbjct 899811 AGGTCAATTTCCTCGGCGGTCCAAAAGGAGGCTTC 899777
Score = 131 bits (144), Expect = 3e-24
Identities = 366/547 (67%), Gaps = 36/547 (7%)
Strand=Plus/Minus
Query 2069252 GGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGG 2069311
|||| || || |||| ||| |||| | || | || ||||||| ||||| | || |
Sbjct 180502 GGTCCACCGTGAACTTGATCGCGTCCGTCGCGCTCTGGATGCGCAGGTAGTAGAGTCCCG 180443
Query 2069312 TCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGA-------CTCGGCA 2069364
| ||||| || | ||||||||| |||||| ||| | | ||||||
Sbjct 180442 TTTTGAGCCCTTGTTTCCACGCGTAAAAGTGCATGCTCGTCAGCGCACCAAAGCTCGGC- 180384
Query 2069365 TTCGGGACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCG 2069424
|| | |||| | |||| ||||||||| |||| || | |||||||| ||
Sbjct 180383 --CGCG-CGGC---GAAGAGCGAGAGCGACTGCGACTGGCAGATGAACGGCGCGCGCGCG 180330
Query 2069425 GCCGCCATGTCGATG--GTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCCT 2069482
||| |||||||||| | ||| | | || |||||| ||||||||||| ||||
Sbjct 180329 ACCGACATGTCGATGTAGCTGCGCTGCTTGAT--CTCCCAGGTCGTCTTGAACAGCGCCT 180272
Query 2069483 TGAGATGCGGCGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCCCT-GCGCTGCGATG 2069541
| || || |||| | || ||| |||| |||||||||||| | | || ||||||
Sbjct 180271 TCAGCGGCTGCGGGATTTCCTCG--ATCAG----CTGCACCGAGCCGTTGTGC-GCGATG 180219
Query 2069542 AGGCGGTCGCGAAAGT-CGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCG-ACCAGGT 2069599
|| | | || || | || |||||| ||| || | | |||| | |||| ||
Sbjct 180218 AGCTGCT-GCTTCAGCGCCTCCGACCACAGCCCGAGCTTCGAGA-GCGCGAGCACCAAGT 180161
Query 2069600 GGCGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGA 2069659
| ||||| |||| || ||||| ||||||||||||||| | | ||| ||||
Sbjct 180160 GCTTGTTGAGCACGCAGAACTCGCCGCTGAGCACGCGGCGCGTAAACACGTTCGACGTGT 180101
Query 2069660 TGACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCG 2069719
|||| ||| |||| ||| || ||||||||||| |||| ||||| ||||| |||
Sbjct 180100 ACGGCTCGAACGACTCGCAGTTCCCGAGGATCTGCGAAGTCGACGCCGTCGGCATCGGCG 180041
Query 2069720 CCACGAGCAGCGAGTTGCGCAGGCCGTACTGTCGCACCAGCGCC---CGCAGGGCGTCCC 2069776
| || ||||| ||||||||| ||||||| |||| |||| ||||| | ||||
Sbjct 180040 CGACCAGCAGGCTGTTGCGCAGCCCGTACTTG---ACCATCGCCTCGCGCAGCTCCTCCC 179984
Query 2069777 AGTCCCA 2069783
|||||||
Sbjct 179983 AGTCCCA 179977
Score = 116 bits (128), Expect = 6e-20
Identities = 293/449 (65%), Gaps = 2/449 (0%)
Strand=Plus/Minus
Query 2071565 GCGACGAAAACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCT 2071624
|||||| |||| || || || ||||||||||| | ||| ||||||| ||||||
Sbjct 179521 GCGACGTGTACTGCACCACTTCCGTGCACAGGTTCGAGGACTGGATGGTGCCGAGGTTCC 179462
Query 2071625 GCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGA 2071684
||||||| | ||||| |||||||||| || || ||| || ||||||||||
Sbjct 179461 GCTGGTTCGACTTGCGGTTGCACGCGTCCTTGTACACCAAGTACGGATTGCCCGTCTCGA 179402
Query 2071685 TCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGC-GCGG 2071743
|||||| | || ||| ||| ||| | |||||| |||| | | || |||
Sbjct 179401 TCTGCGTGTTCACAATGACCGTCCAGAGCGCGCGCGCCTTCACCT-GCCGCACGAAGCGC 179343
Query 2071744 CCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGG 2071803
|| | || ||||| || | ||||| | ||| || |
Sbjct 179342 TGCTCGGCCTCGTAGCGCGTGTACAGCGCGTCGAACTCCGCGCCCCAGACTTCGAACAAG 179283
Query 2071804 CCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATA 2071863
|| |||| || | || || | || ||| ||||| | |||||||||||||
Sbjct 179282 CCCGGCGACTGCGCGGGACACATCAGACTCCACACGCCGTCTTCGTCCACGCGGCGCATG 179223
Query 2071864 AACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCG 2071923
|||| |||| | |||| || ||||| || |||| || ||| || ||||||
Sbjct 179222 AACAAGTCGTTGATGTACAGCCCCAGGAAGAGGTCCCGCGTGCGCAACTCTTCGTTGCCG 179163
Query 2071924 TGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAG 2071983
||||| ||| |||| | |||| || ||| |||||||||||||||||||||
Sbjct 179162 TGGTTGCGCCGCAGCTCGATGAACTCGAAGATGTCTGCGTGCCACGGCTCCAGGTAGATC 179103
Query 2071984 GCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012
|| ||| |||| |||||||||||||||||
Sbjct 179102 GCGAAGCCGCCTTTGCGCTTGCCGCCGCC 179074
Score = 96.9 bits (106), Expect = 5e-14
Identities = 164/235 (70%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCT-CGAGCGAGATCAACTCCAT 793966
|| || || |||||| ||||||||||| || ||||||| | ||| | |||| ||||||
Sbjct 900591 TAGTCTCCGACGCGCTTTTCGAAAAAGTTCGTTTTGCCCTGCAAGCTA-ATCATCTCCAT 900533
Query 793967 CCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCG 794026
||| ||||||||| || |||| | |||| | || | || | ||||| ||
Sbjct 900532 CCAGCTGAACGGGTTTTGCGAGCCGTAGAACGGCTCGTAGCCCACGGAGGTGAGCAGCCG 900473
Query 794027 GTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCAC 794086
||||| ||| | || | |||||| ||| | | | |||||||||||||| ||| | |
Sbjct 900472 GTCGGTAACGCACTCCAGGTACTGCACCATCAAGTCTGCGTTCATGCCGATCAGCCCGGC 900413
Query 794087 GGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATC 794141
||||||| |||| ||| || | ||| | |||| |||||| || ||||
Sbjct 900412 CGGCAGCGCCTCGGTGATGAAGTGGCGCTCTACGTCGAGCGCCTCGCAGACGATC 900358
>seq768
Length=1243675
Score = 138 bits (152), Expect = 2e-26
Identities = 209/291 (72%), Gaps = 10/291 (3%)
Strand=Plus/Plus
Query 429527 CGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAACCGGCAGCCGTCGCTCCA 429586
||||||||| ||| ||| |||||||||| |||| || | ||||||||||| ||||| ||
Sbjct 884392 CGTCGAGCGGCACTTGCTCACCGGCGACTTCGTGCTCTTCAACCGGCAGCCCTCGCTGCA 884451
Query 429587 CATGGGGTCGATGCTCAACCACAAGGTG---GTGCCCATGCCCGG-TCGCACCTTCCGGC 429642
|| | | || | |||| ||| ||| |||||| ||| ||||||||
Sbjct 884452 CAAGATGAGCATCATGGGCCACCGCGTGCGCGTG---ATGCCCTACTCG-ACCTTCCGCG 884507
Query 429643 TCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGC 429702
| ||||| ||| || | |||||||||||||| ||||||||||||||||||||||
Sbjct 884508 TGAACCTCAGCGTCACCTCGCCGTACAACGCCGACTTCGACGGCGACGAGATGAACCTGC 884567
Query 429703 ACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTCGCCCACACCATG-GGCGTGGCCCTC 429761
|| || | ||| || | ||| ||||||||| || ||| | || | |||| || ||
Sbjct 884568 ACCTGGCGCAGACGCACGAGGCGCGCGCCGAAATCCGGCAC-CTGTGCGCCGTGCCCTTC 884626
Query 429762 AAGGCCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGGCTCGTGATGGAC 429812
|| ||| ||||||||| |||||||||| | || || | ||| ||||
Sbjct 884627 CAGATCGTCTCGCCGCAGAGCAACAAGCCCGTGATGGGCATTGTGCAGGAC 884677
Score = 113 bits (124), Expect = 7e-19
Identities = 144/196 (73%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 429029 GCGGTCGGGCAAGCCCACCAAGGGCGTCGTGGAGCGATTCAAGGGCAAGGAGGGCCGGAT 429088
||||||| ||||||| | || || | ||| || || || ||||||||||||||| |
Sbjct 884044 GCGGTCGCGCAAGCCGATGAAAAGCATTCGGGAACGCTTGAAAGGCAAGGAGGGCCGGCT 884103
Query 429089 CCGCGGCAATTGCATGGGCAAGCGCGTCAACTTTACGGCGCGCGCCGTCATCAGTCCCGA 429148
|||||||| |||||||||||||| |||| | |||||| ||||||||| |||
Sbjct 884104 GCGCGGCAACCTGATGGGCAAGCGCGTGGACTTCAGCGCGCGCACCGTCATCACCGGCGA 884163
Query 429149 CCCCGAAATCGACATTGACGAGGTGGGCGTGCCCTATGAG-ATCGTCAAGACGCTCACCT 429207
||| | ||||| | ||||| || ||||||||| || || |||| | | || || |
Sbjct 884164 CCCTAACATCGAGCTGGACGAAGTCGGCGTGCCC-ATCAGCATCGCGATGTGCCTGACGT 884222
Query 429208 TTCCCGAGCGCGTGAC 429223
| ||||||| |||||
Sbjct 884223 TCCCCGAGCTAGTGAC 884238
Score = 107 bits (118), Expect = 3e-17
Identities = 109/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 431021 GCCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGAT 431080
|||||| ||||||||||| || |||||||||||| || ||||| | ||| ||| |
Sbjct 885559 GCCCGACAGCCGCGGCTTCGTCCGCAACTCGTACCTGCAGGGCCTGACGCCGCAGGAGCT 885618
Query 431081 GTTTCTGCACATGATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGA 431140
||| | ||| ||| ||||| ||||| || || ||||||| || ||| || ||||
Sbjct 885619 GTTCTTCCACGCGATGGGCGGCCGCGAAGGCATCATCGACACTGCGTGCAAAACCTCCGA 885678
Query 431141 GACGGGCTACATCCAGCGTCGG 431162
||| ||||||||||||||||||
Sbjct 885679 GACCGGCTACATCCAGCGTCGG 885700
Score = 91.5 bits (100), Expect = 2e-12
Identities = 213/312 (68%), Gaps = 21/312 (7%)
Strand=Plus/Plus
Query 653528 AAGCGCGACAAGTCGACCATCCTGCGCACCAACGAGGCCGCCACGGTGCACCGCGTCGTG 653587
||||||||| ||||||||| ||||| |||||||| || | | | || |||| ||
Sbjct 334147 AAGCGCGACGCGTCGACCATTTTGCGCTCCAACGAGAACGGCGTGATCGACAGCGTGCTG 334206
Query 653588 GTGACGCGCAACGGCG--ACGGCGCCAACGCGGT-CAAGATCGTCACC---CGCGCCATG 653641
| | || ||||| | || || ||||| | | || |||| ||| |||
Sbjct 334207 CTCA---GCTGCGGCGTGAAGG-GC--ACGCGCTTCGCGAAAGTCAAAGTACGCAGCATT 334260
Query 653642 CGCCAGCCCGAGGTGGGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACCGTGGG- 653700
||| ||| || | |||||||| | | |||||||||||||| || |||||| | ||
Sbjct 334261 CGCGTGCCGCAGATTGGCGACAAGTTCGCCTCGCGCCACGGGCAGAAAGGCACCATTGGG 334320
Query 653701 --CAGCGTGCGCTCGACCGAGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGAC 653758
|| ||||| | | || || |||||| |||||| ||| | ||||||||||
Sbjct 334321 TTCACGCTGCGC-CAA--GAAGACCTGCCGTTTTCGCCGGACGG---CATCACGCCCGAC 334374
Query 653759 ATCGTCATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCC 653818
| | || |||||||||||| | || |||||||||||||| || | || | ||| |
Sbjct 334375 TTGTTGATGAACCCGCACGCCGTGCCCTCGCGCATGACCATTGGACATTTGGTAGAGTGC 334434
Query 653819 CTCCTGGGCAAG 653830
|| ||||||||
Sbjct 334435 TTCTTGGGCAAG 334446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916105772830358
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