Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq558 132 3e-26
seq768 131 1e-25
seq1 87.8 1e-12
seq391 82.4 5e-11
>seq558
Length=611125
Score = 132 bits (146), Expect = 3e-26
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| |||||| ||| ||| ||||||||||| ||||||| || |||| | ||
Sbjct 303926 CAGTACCAAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGCGAGCGTGCGTCCGTC 303867
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||| || ||||| || || ||||||| || |||||||| |||| | ||||| |||||
Sbjct 303866 GTCGAGCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGGAATGCCCTCTTTGTC 303807
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || ||||||| | |||| || || | || || || | |||||| |
Sbjct 303806 CTGGATCTTAGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCACTTCGAGCGTTATGTT 303747
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
||| |||||||| ||||| ||||| |||||||| ||
Sbjct 303746 CTTGCCCGTGAGTGTCTTGACAAATATCTGCATCAT 303711
>seq768
Length=1243675
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || | || || ||| |||| ||| || || |||||| || ||||| |||||||
Sbjct 1130696 CCGCCACGCAGCCGCAGCACCAAGTGGATCGTCGACTCCTTTTGGATGTTGTAGTCCGCG 1130755
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| ||||| | || |||| ||||| ||||| || ||||| || |||||||| ||||
Sbjct 1130756 AGCGTGCGCCCGTCATCCAACTGCTTCCCGGCAAAAATCAGACGCTGCTGGTCCGGCGGA 1130815
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||||||||||| | || || ||||||| | |||| || || | || ||
Sbjct 1130816 ATGCCCTCCTTGTCCTGGATCTTAGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCACC 1130875
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
|||| ||| ||| |||| |||||||| ||||| || ||||| ||||| ||
Sbjct 1130876 TCAAGGGTGATGTTCTTCCCCGTGAGCGTCTTCACGAAGATTTGCATCAT 1130925
>seq1
Length=3593316
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
||||| |||||||| || || || | | | |||| |||| |||||||||||| |||
Sbjct 1032092 TCCTTTTGAATGTTGTAATCGGACAAAGTTCTTCCATCTTCCAATTGCTTTCCGGCAAAG 1032151
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| ||||||||| ||| | || | ||||| ||||| | ||||| ||| || |
Sbjct 1032152 ATCAATCGTTGCTGATCTGGGGGAATTCCCTCTTTGTCCTGGATTTTGGCTTTTACATTT 1032211
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| |||| ||| | |||||| || | || || || || || || || || || ||
Sbjct 1032212 TCGATCGTATCAGATGGCTCGACTTCCAATGTAATAGTTTTACCGGTAAGAGTTTTGACG 1032271
Query 34967 AAGATCTGCAT 34977
|| || |||||
Sbjct 1032272 AAAATTTGCAT 1032282
>seq391
Length=841353
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTG-AATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
|||||| ||||||| || ||||| || || | || | ||||| |||||||| || || |
Sbjct 250933 TCCTCCTCTCAACCGCAACACCAGATGCAAAGTTGAT-TCCTTTTGAATGTTGTAATCTG 250991
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
| | | ||| |||||| ||||||||||| || || || | || || || || |||
Sbjct 250992 ACAATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCG 251051
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928
| | ||| || || || | ||||| ||| ||| | | || | || || | ||| |
Sbjct 251052 GAATCCCTTCTTTATCCTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTA 251111
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | | || | ||||| || | || |||||||| || |||||
Sbjct 251112 CTTCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325687552478318
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |