Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq391 104 2e-17
seq1 93.3 3e-14
>seq391
Length=841353
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||||||||| |||||||| ||||| |||| ||| | ||||| ||| | |
Sbjct 251160 ATGCAAATTTTTGTAAAAACTTTGACAGGAAAAAATATTTCTCTCGAAGTAGAGCCAAAC 251101
Query 107616 GATACTGTCGGCCAGGT-AAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| | | || ||||| ||| ||| ||||||||||| | || |||||
Sbjct 251100 GATACCATTGAAAGCGTGAAAACGAAA-ATTCAGGATAAAGAAGGGATTCCGCCTGATCA 251042
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||| | | |||| ||| || || || || || || | ||| || | || |||||
Sbjct 251041 ACAGCGGTTAATTTTTGCTGGAAAGCAACTTGACGATTCGCGGACATTGTCAGATTACAA 250982
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGA 107783
|||||||||||| || || ||||| |||||||| | ||| |||| |||
Sbjct 250981 CATTCAAAAGGAATCAACTTTGCATCTGGTGTTGCGGTTGAGAGGAGGA 250933
>seq1
Length=3593316
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||||||||| || |||||||| || |||||||||||||| | ||| || |
Sbjct 1033253 ATGCAAATTTTCGTAAAAACTTTGACTGGCAAAACCATTACTTTGGAAGTCGAACCATCG 1033194
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| ||| ||| | || ||| || || ||||||||||| | || ||||||
Sbjct 1033193 GACACTATCGAAAATGTGAAAGCTAAAATCCAGGATAAAGAAGGTATTCCACCAGATCAG 1033134
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| || | || | ||| |||||||| || || || | | |||| || |||| || ||
Sbjct 1033133 CAACGATTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGAACATTGTCGGATTATAAT 1033074
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
|| ||||| || || || || || |||| ||| | || || || ||||
Sbjct 1033073 ATACAAAAAGAATCCACCTTACATTTGGTATTGCGTTTACGTGGTGGAA 1033025
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||||||||| || ||||| || || || |||||||| ||| | ||| ||| |
Sbjct 1031827 AATGCAAATTTTCGTAAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAACCATC 1031768
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|||||| ||| | || ||| ||| || || |||||||| | || |||||
Sbjct 1031767 GGATACTATCGAAAATGTCAAAGCAAAAATCCAAGACAAAGAAGGTATTCCACCAGATCA 1031708
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||| | | || | ||| || ||||| |||| || | |||| || | || || ||
Sbjct 1031707 GCAGCGTTTGATCTTTGCCGGAAAACAATTGGAAGATGGTCGAACATTGTCCGATTATAA 1031648
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAA 107785
||| ||||| || || || || || |||| ||| || | || || |||||
Sbjct 1031647 CATCCAAAAAGAATCGACATTACATTTGGTATTGCGACTTCGTGGTGGAAA 1031597
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||||||||| ||||||||| | || || ||||| ||||| | ||| ||| |
Sbjct 1032282 ATGCAAATTTTCGTCAAAACTCTTACCGGTAAAACTATTACATTGGAAGTCGAGCCATCT 1032223
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | |||||| || || || ||||| || | ||| ||||||
Sbjct 1032222 GATACGATCGAAAATGTAAAAGCCAAAATCCAGGACAAAGAGGGAATTCCCCCAGATCAG 1032163
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| || | || | ||| || || || |||| || | | ||| || | || ||||||
Sbjct 1032162 CAACGATTGATCTTTGCCGGAAAGCAATTGGAAGATGGAAGAACTTTGTCCGATTACAAC 1032103
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTT 107767
||||||||||| || || ||||| |||| ||
Sbjct 1032102 ATTCAAAAGGAATCGACATTGCATTTGGTTTT 1032071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398870373346858
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |