Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq1 181 8e-41
seq391 147 2e-30
seq558 127 2e-24
seq768 86.0 5e-12
>seq1
Length=3593316
Score = 181 bits (200), Expect = 8e-41
Identities = 173/219 (79%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCG 29627
||||||| |||||||| | |||||||||||||| || |||||||||| |||| || ||
Sbjct 1033036 AAACGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCGACAAT-GTTCG 1033094
Query 29628 AGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTC 29687
||| ||||||||||| |||||| | ||||||| ||||||||| || |||||||| ||
Sbjct 1033095 GCCATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTC 1033154
Query 29688 TTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGT 29747
||| || || | ||| ||| ||| |||| | |||||| || |||| ||||| | |||
Sbjct 1033155 TTTATCCTGGATTTTAGCTTTCACATTTTCGATAGTGTCCGATGGTTCGACTTCCAAAGT 1033214
Query 29748 TATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||||||||| || ||||| || || || |||||
Sbjct 1033215 AATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
Score = 154 bits (170), Expect = 1e-32
Identities = 166/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGA 29630
|||| |||||||| | || ||||||||||| ||||||||||| | |||| || |||
Sbjct 1031612 CGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGACAAT-GTTCGACC 1031670
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || | |||||| || ||| | ||||| | |||||||| || |||||||| |||||
Sbjct 1031671 ATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGAATACCTTCTTT 1031730
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|||||| | |||| ||||||| |||| | ||| || || |||| ||||| | || ||
Sbjct 1031731 GTCTTGGATTTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCCACTTCCAAGGTGAT 1031790
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||||| || || || ||||| || || || ||||||
Sbjct 1031791 GGTTTTACCGGTCAATGTTTTTACGAAAATTTGCATT 1031827
Score = 154 bits (170), Expect = 1e-32
Identities = 167/219 (76%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCG 29627
|| |||| || | |||||| || ||||||||||||||||| ||||||| |||| || ||
Sbjct 1032521 AATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGACAAT-GTTCG 1032579
Query 29628 AGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTC 29687
||| || || ||||||||||| | ||||| | |||||| || || ||||| || ||
Sbjct 1032580 GCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGAATTCCTTC 1032639
Query 29688 TTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGT 29747
||||||||| | ||| |||||| |||| | || || || |||| ||||| | ||
Sbjct 1032640 TTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCACTTCCAATGT 1032699
Query 29748 TATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| ||||| || ||||| ||||| ||||||||
Sbjct 1032700 AATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
Score = 141 bits (156), Expect = 7e-29
Identities = 163/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||||||||| | ||||||||||||||||| || ||||| | | ||| ||
Sbjct 1031839 ACGAAGCACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCGGATAAGGTACGGCC 1031898
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || | |||||| ||||| | ||||| | ||||||||| || |||||||| || ||
Sbjct 1031899 ATCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCCTT 1031958
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||||| ||| || | ||| ||| |||| | || || || | || ||||| | ||| |
Sbjct 1031959 ATCTTG-AATCTTGGCTTTTACATTTTCGATTGTATCCGATGGCTCGACTTCCAAAGTGA 1032017
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| ||||| ||||||| ||| || || || || |||||
Sbjct 1032018 TCGTTTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1032054
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637
|||||||| | || ||||| ||||||||||| ||||| | | || | ||| ||
Sbjct 1032074 ACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGGACAAAGTTCTTCCATCTTCC 1032133
Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697
| ||| || || ||| | ||||||| ||||||||| || ||||| ||||||||||| ||
Sbjct 1032134 AATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGGGAATTCCCTCTTTGTCCTGG 1032193
Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757
| ||| ||| ||| |||| | || ||||| | || ||||| | || ||||||||
Sbjct 1032194 ATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGACTTCCAATGTAATAGTTTTA 1032253
Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || | ||||| || || || |||||
Sbjct 1032254 CCGGTAAGAGTTTTGACGAAAATTTGCAT 1032282
Score = 86.0 bits (94), Expect = 5e-12
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642
|||||| || ||||||||||||||||| ||||||| | ||||||| ||| || | ||
Sbjct 1032763 ATGAAGTGTAGATTCTTTTTGAATGTTGTAATCCGATAGGGTGCGACCATCTTCCAACTG 1032822
Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACC 29684
||| || ||| | ||||| | ||||||||| || || || ||
Sbjct 1032823 TTTACCTGCAAAAATCAAACGTTGCTGATCTGGTGGGATGCC 1032864
>seq391
Length=841353
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| || | || ||||| || || | ||| |||||||| || || || || || |
Sbjct 251390 CCTCCTCTAAGCCGTAGCACTAAGTGTAACGTCGATTCTTTCTGGATATTGTAGTCTGAC 251449
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | |||||| || | |||||| |||||| | || |||| ||| ||||| ||||||
Sbjct 251450 AAAGTTCTAGAATCTTCTAATTGTTTTCCAGCAAAAATTAATCGTTGTTGATCAGGCGGA 251509
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTG-ACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || || || || |||||| |||| ||| |||| | ||||||| |||||||
Sbjct 251510 ATTCCTTCCTTATCCTG-AATTTTCGTTTTCACATTTTCAATTGTGTCAGTGGGTTCTAC 251568
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| | ||| |||| || ||||| ||||| ||||||||||||||
Sbjct 251569 CTCAAGCGAAATATTTTTACCTGTTAATGTTTTTACAAATATCTGCAT 251616
Score = 140 bits (154), Expect = 2e-28
Identities = 172/230 (75%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG- 29617
|||||| ||||| |||| ||||| ||| | || ||||| ||||||||||| ||||| |
Sbjct 250933 TCCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGA 250992
Query 29618 CAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCG 29677
|||| || || ||||| || ||||| || |||||| | || || | || ||||| ||||
Sbjct 250993 CAAT-GTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCG 251051
Query 29678 GAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736
|||| || ||||| || || |||||| | ||| || |||| | || || | |||
Sbjct 251052 GAATCCCTTCTTTATCCTG-AATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCT 251110
Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| |||| ||| |||| || || || ||||| ||||| || |||||
Sbjct 251111 ACTTCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
Score = 140 bits (154), Expect = 2e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| || | ||| ||||| ||||||| ||||||||||| || ||||| || || |
Sbjct 730826 CCTCCTCTAAGACGAAGCACTAAATGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGAT 730885
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||| || || ||||| || |||||| | || | ||||||||||||||| |||
Sbjct 730886 AAAGTGCGGTTGTCGTCTAGTTGCTTACCAGCAAAAATAAGTCTTTGCTGATCCGGGGGA 730945
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| ||||| | || | ||||||| |||| ||
Sbjct 730946 ATTCCTTCTTTGTCTTGGATTTTGGTTTTGATGGACTCAATAGTGTCATTTGGTTCCACC 731005
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || | || || ||||| ||||| || || ||||||||
Sbjct 731006 TCCAGGGTAATGTTCTTCCCTGTTAATGTTTTCACGAAAATCTGCAT 731052
Score = 113 bits (124), Expect = 3e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| ||||| || || | ||||||||||| || || || || || | | || | ||||
Sbjct 251174 CGAAGCACTAAGTGTAATGTGGATTCTTTCTGGATATTGTAGTCTGACAAAGTTCTAGAA 251233
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || | ||||| |||||| | || |||| || || || |||||||| || ||||||
Sbjct 251234 TCTTCTAACTGTTTTCCAGCAAAAATTAATCGCTGTTGGTCTGGCGGAATCCCTTCTTTG 251293
Query 29692 TCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|| || |||||| | || ||| | || | |||||| |||| ||||| | || |||
Sbjct 251294 TCCTG-AATTTTCATCTTTACACTCTCAATAGTGTCGTTGGGTTCGACTTCCAAAGATAT 251352
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| |||| || |||||||| || ||||| || || ||
Sbjct 251353 ATTTTTTCCTGTTAAGGTCTTTACAAAAATTTGTAT 251388
>seq558
Length=611125
Score = 127 bits (140), Expect = 2e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
||||| ||||| |||| ||||| ||||| |||||||| || ||||| | |||||
Sbjct 303928 CGCAGTACCAAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGCGAGCGTGCGTCCG 303869
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| ||||| || || || ||| | ||||| | ||||| ||||||||||| |||||||||
Sbjct 303868 TCGTCGAGCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGGAATGCCCTCTTTG 303809
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || |||||| | || | ||||| | || ||||| || |||||
Sbjct 303808 TCCTGGATCTTAGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCACTTCGAGCGTTATG 303749
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| ||||| || | || || ||||||||||||||
Sbjct 303748 TTCTTGCCCGTGAGTGTCTTGACAAATATCTGCAT 303714
>seq768
Length=1243675
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
||||||||||| || | ||| || || ||||| ||||| || ||||| | |||||
Sbjct 1130708 CGCAGCACCAAGTGGATCGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGCGTGCGCCCG 1130767
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
||||| | || || || ||| | |||| | ||||| ||||||||||| ||||| |||
Sbjct 1130768 TCATCCAACTGCTTCCCGGCAAAAATCAGACGCTGCTGGTCCGGCGGAATGCCCTCCTTG 1130827
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || |||||| | || | ||||| | || || ||||| || ||
Sbjct 1130828 TCCTGGATCTTAGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCACCTCAAGGGTGATG 1130887
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || || | || || || || || |||||
Sbjct 1130888 TTCTTCCCCGTGAGCGTCTTCACGAAGATTTGCAT 1130922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385212993396402
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