Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq458 149 8e-31
seq456 87.8 2e-12
>seq458
Length=503182
Score = 149 bits (164), Expect = 8e-31
Identities = 183/250 (73%), Gaps = 0/250 (0%)
Strand=Plus/Minus
Query 168520 TTCTTAAAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATA 168579
|| || ||||| | |||||| |||||||||||||||||||||| ||| ||||| || |
Sbjct 280984 TTGTTGAAGAATTATTATGGTTTATAAAAGGTTCAACTGATTCGAAAAAATTATCCGAAA 280925
Query 168580 TAGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTA 168639
|||||| ||| ||||| | | |||||||| |||||| | ||| ||||||||
Sbjct 280924 AAGGTGTAAAAATTTGGGATGCAAATGGTTCAAAAGAATTTCTTGATAGTCTTGGTTTTA 280865
Query 168640 CCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAG 168699
|| | ||||||||||| ||||||| ||||||| ||||||||||||||| || |
Sbjct 280864 TTGATCGTCAAGAAGGTGATCTAGGTCCTGTTTATGGTTTTCAATGGAGACATTTTGGTG 280805
Query 168700 CTCAATATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAAA 168759
| ||||| ||| | | || ||||| | || ||||| | || ||||||| ||
Sbjct 280804 CCGAATATCGTGATAATCAAACTGATTATAATGGTCAAGGTATTGATCAATTAAAACAGC 280745
Query 168760 CTATAAATAC 168769
|||||| ||
Sbjct 280744 TTATAAAAAC 280735
>seq456
Length=37656
Score = 87.8 bits (96), Expect = 2e-12
Identities = 122/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 51871 ATGGTGATGATGTACTATTAAATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTT 51930
||||||||| | | |||| ||| | ||||||||| | |||||| |||| ||
Sbjct 11490 ATGGTGATGTTATTGTATTTAATCGACAACCAACATTACATAAAATGAGTATGATGGGTC 11549
Query 51931 TTAAAGTTAAAATTCAACCAGTAAAAACATTTAAAATGAATTTGGCTATGACTAAAGCAT 51990
|||| || | |||| ||||||| | ||||| || | || | | |||
Sbjct 11550 ATAAAATTCGTGTATTACCATGGTCAACATTTCGTTTTAATTTATCTGTAACAACACCAT 11609
Query 51991 ATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAATCAT 52041
||||||||||||||||||| |||||||||||||| ||||| || |||||||
Sbjct 11610 ATAATGCTGATTTTGATGGTGATGAAATGAATTTGCATGTACCACAATCAT 11660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635167103690160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |