Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq458 149 8e-31 seq456 87.8 2e-12 >seq458 Length=503182 Score = 149 bits (164), Expect = 8e-31 Identities = 183/250 (73%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 168520 TTCTTAAAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATA 168579 || || ||||| | |||||| |||||||||||||||||||||| ||| ||||| || | Sbjct 280984 TTGTTGAAGAATTATTATGGTTTATAAAAGGTTCAACTGATTCGAAAAAATTATCCGAAA 280925 Query 168580 TAGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTA 168639 |||||| ||| ||||| | | |||||||| |||||| | ||| |||||||| Sbjct 280924 AAGGTGTAAAAATTTGGGATGCAAATGGTTCAAAAGAATTTCTTGATAGTCTTGGTTTTA 280865 Query 168640 CCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAG 168699 || | ||||||||||| ||||||| ||||||| ||||||||||||||| || | Sbjct 280864 TTGATCGTCAAGAAGGTGATCTAGGTCCTGTTTATGGTTTTCAATGGAGACATTTTGGTG 280805 Query 168700 CTCAATATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAAA 168759 | ||||| ||| | | || ||||| | || ||||| | || ||||||| || Sbjct 280804 CCGAATATCGTGATAATCAAACTGATTATAATGGTCAAGGTATTGATCAATTAAAACAGC 280745 Query 168760 CTATAAATAC 168769 |||||| || Sbjct 280744 TTATAAAAAC 280735 >seq456 Length=37656 Score = 87.8 bits (96), Expect = 2e-12 Identities = 122/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 51871 ATGGTGATGATGTACTATTAAATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTT 51930 ||||||||| | | |||| ||| | ||||||||| | |||||| |||| || Sbjct 11490 ATGGTGATGTTATTGTATTTAATCGACAACCAACATTACATAAAATGAGTATGATGGGTC 11549 Query 51931 TTAAAGTTAAAATTCAACCAGTAAAAACATTTAAAATGAATTTGGCTATGACTAAAGCAT 51990 |||| || | |||| ||||||| | ||||| || | || | | ||| Sbjct 11550 ATAAAATTCGTGTATTACCATGGTCAACATTTCGTTTTAATTTATCTGTAACAACACCAT 11609 Query 51991 ATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAATCAT 52041 ||||||||||||||||||| |||||||||||||| ||||| || ||||||| Sbjct 11610 ATAATGCTGATTTTGATGGTGATGAAATGAATTTGCATGTACCACAATCAT 11660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635167103690160