Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq458 122 1e-22 >seq458 Length=503182 Score = 122 bits (134), Expect = 1e-22 Identities = 186/265 (70%), Gaps = 0/265 (0%) Strand=Plus/Minus Query 180420 TTCTTAAAGAATTATTATGGATAATGAAAGGTTTAACAAATTCTAATTTGTTAAATGATA 180479 || || |||||||||||||| | || ||||||| ||| |||| || ||| || | Sbjct 280984 TTGTTGAAGAATTATTATGGTTTATAAAAGGTTCAACTGATTCGAAAAAATTATCCGAAA 280925 Query 180480 TTGGTGTTAAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATTTC 180539 ||||| ||| | ||| ||| |||||||| | ||| | ||| | ||| ||| Sbjct 280924 AAGGTGTAAAAATTTGGGATGCAAATGGTTCAAAAGAATTTCTTGATAGTCTTGGTTTTA 280865 Query 180540 ATTTTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAG 180599 | ||| ||||||||||| |||| || ||||||| ||||||||||||||| || | Sbjct 280864 TTGATCGTCAAGAAGGTGATCTAGGTCCTGTTTATGGTTTTCAATGGAGACATTTTGGTG 280805 Query 180600 CTCAATATATTGACTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAG 180659 | ||||| ||| | | || | |||| || |||||||| || ||||||| || Sbjct 280804 CCGAATATCGTGATAATCAAACTGATTATAATGGTCAAGGTATTGATCAATTAAAACAGC 280745 Query 180660 TTATAGAAACTATAAAAAATAATCC 180684 ||||| |||| || |||| ||||| Sbjct 280744 TTATAAAAACAATCAAAACAAATCC 280720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655269171498000