Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq458 140 4e-28
seq456 93.3 5e-14
>seq458
Length=503182
Score = 140 bits (154), Expect = 4e-28
Identities = 187/259 (72%), Gaps = 1/259 (0%)
Strand=Plus/Minus
Query 171608 TTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAG 171667
|| ||||| | |||||| |||| ||||||||||||||||| ||| ||||| || | ||
Sbjct 280981 TTGAAGAATTATTATGGTTTATAAAAGGTTCAACTGATTCGAAAAAATTATCCGAAAAAG 280922
Query 171668 GTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTG 171727
|||| ||| ||||| ||| |||||||| |||||| | ||| || |||| ||
Sbjct 280921 GTGTAAAAATTTGGGATGCAAATGGTTCAAAAGAATTTCTTGATAGTCTTGGTTTTATTG 280862
Query 171728 AAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTC 171787
| | ||||||||||| ||||||| ||||||| ||||||||||||||| || ||
Sbjct 280861 ATCGTCAAGAAGGTGATCTAGGTCCTGTTTATGGTTTTCAATGGAGACATTTTGGTGCCG 280802
Query 171788 AATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTA 171847
||||| || | | || ||||| | || ||||| | || ||||||| || ||
Sbjct 280801 AATATCGTGATAATCAAACTGATTATAATGGTCAAGGTATTGATCAATTAAAACAGCTTA 280742
Query 171848 TTAATACTTTACAAAACAA 171866
| || || | ||||||||
Sbjct 280741 TAAAAACAAT-CAAAACAA 280724
>seq456
Length=37656
Score = 93.3 bits (102), Expect = 5e-14
Identities = 123/171 (72%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 50321 ATGGTGATGATGTACTATTAAATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTT 50380
||||||||| | | |||| ||| | ||||||||| | |||||| |||| ||
Sbjct 11490 ATGGTGATGTTATTGTATTTAATCGACAACCAACATTACATAAAATGAGTATGATGGGTC 11549
Query 50381 TTAAAGTTAAAATTCAACCAGTAAAAACATTTAAAATGAATTTAGCTATGACTAAAGCAT 50440
|||| || | |||| ||||||| | |||||| || | || | | |||
Sbjct 11550 ATAAAATTCGTGTATTACCATGGTCAACATTTCGTTTTAATTTATCTGTAACAACACCAT 11609
Query 50441 ATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAATCAT 50491
||||||||||||||||||| |||||||||||||| ||||| || |||||||
Sbjct 11610 ATAATGCTGATTTTGATGGTGATGAAATGAATTTGCATGTACCACAATCAT 11660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628520813521920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |