Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq391 197 3e-45
seq1 172 1e-37
seq558 116 7e-21
seq657 100 6e-16
>seq391
Length=841353
Score = 197 bits (218), Expect = 3e-45
Identities = 181/229 (79%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||||||||| | || || |||||||| | || ||||||||||| ||||| || || |
Sbjct 251388 TACCTCCTCTAAGCCGTAGCACTAAGTGTAACGTCGATTCTTTCTGGATATTGTAGTCTG 251447
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | ||||| ||||||| ||||||||||||||| |||| || ||||||||| || |
Sbjct 251448 ACAAAGTTCTAGAATCTTCTAATTGTTTTCCAGCAAAAATTAATCGTTGTTGATCAGGCG 251507
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| |||||||||||||| ||||| || | ||| ||||||||||| || ||| | |||||||
Sbjct 251508 GAATTCCTTCCTTATCCTGAATTTTCGTTTTCACATTTTCAATTGTGTCAGTGGGTTCTA 251567
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | | || | || ||||| || || |||||||||||||||||
Sbjct 251568 CCTCAAGCGAAATATTTTTACCTGTTAATGTTTTTACAAATATCTGCAT 251616
Score = 165 bits (182), Expect = 2e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||| | || || |||||||| | || ||||||||||| ||||| || || |
Sbjct 251160 TACCACCTCTAAGTCGAAGCACTAAGTGTAATGTGGATTCTTTCTGGATATTGTAGTCTG 251219
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | ||||| ||||||| |||||||||||||| |||| || ||||| ||||| |
Sbjct 251220 ACAAAGTTCTAGAATCTTCTAACTGTTTTCCAGCAAAAATTAATCGCTGTTGGTCTGGCG 251279
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||| || || ||||| || |||||| | ||||| || || || ||||| |
Sbjct 251280 GAATCCCTTCTTTGTCCTGAATTTTCATCTTTACACTCTCAATAGTGTCGTTGGGTTCGA 251339
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||||| ||| | || ||||| || ||||||||||| || || ||
Sbjct 251340 CTTCCAAAGATATATTTTTTCCTGTTAAGGTCTTTACAAAAATTTGTAT 251388
Score = 145 bits (160), Expect = 1e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||||||||| | ||| || ||||| || | || ||||||||||| || || || || ||
Sbjct 730825 ACCTCCTCTAAGACGAAGCACTAAATGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGA 730884
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| | | | ||| |||||||| || |||||||| || |||||||| ||||| || ||
Sbjct 730885 TAAAGTGCGGTTGTCGTCTAGTTGCTTACCAGCAAAAATAAGTCTTTGCTGATCCGGGGG 730944
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|||||||| || ||||| || || | ||| | ||||| || ||||| ||||| ||
Sbjct 730945 AATTCCTTCTTTGTCTTGGATTTTGGTTTTGATGGACTCAATAGTGTCATTTGGTTCCAC 731004
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || |||| ||||| || || || || || ||||||||
Sbjct 731005 CTCCAGGGTAATGTTCTTCCCTGTTAATGTTTTCACGAAAATCTGCAT 731052
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||||||||| |||| || | |||| ||| ||||| || || || || ||||| ||
Sbjct 250934 CCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGAC 250993
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | || || ||||| ||||||||||| |||| | |||||||| || ||
Sbjct 250994 AATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGA 251053
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| ||||| ||||| || | ||| || ||||||| ||||| || || ||||||
Sbjct 251054 ATCCCTTCTTTATCCTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTACT 251113
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || | || |||||||| || |||||||| || |||||
Sbjct 251114 TCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
>seq1
Length=3593316
Score = 172 bits (190), Expect = 1e-37
Identities = 169/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 82593 AAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTA 82652
||||||| || || || | || |||||||| |||||||||||||| || | |||
Sbjct 1033036 AAACGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCGACAATGTTCGG 1033095
Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712
|| ||||| |||||||| ||||||||||| | || ||| |||||||| || || |||||
Sbjct 1033096 CCATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCT 1033155
Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772
||||| || || || ||||| |||||||| || || || ||||| |||||||||||
Sbjct 1033156 TTATCCTGGATTTTAGCTTTCACATTTTCGATAGTGTCCGATGGTTCGACTTCCAAAGTA 1033215
Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || ||||| ||||| || ||||| || || |||||
Sbjct 1033216 ATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
Score = 172 bits (190), Expect = 1e-37
Identities = 178/233 (76%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||||| || || |||| || ||||| || || ||||||||||| |
Sbjct 1033253 TACCGCCACGTAGACGCAATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCGG 1033312
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | | ||| ||||| | |||||| ||||||||||| | || ||| |||||||| |
Sbjct 1033313 ACAAAGTACGACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTG 1033372
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||| ||||||||||| || ||||| |||||||| || || || ||||| |
Sbjct 1033373 GAATGCCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCGATGGTGTCCGATGGTTCGA 1033432
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814
|||||||||| || || || || ||||| || ||||| || || ||||| |||
Sbjct 1033433 CTTCCAAAGTGATGGTTTTACCAGTCAATGTTTTTACGAAGATTTGCATGATT 1033485
Score = 156 bits (172), Expect = 8e-33
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || || || | || |||||||| || ||||| ||||| |||| | | ||
Sbjct 1031839 ACGAAGCACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCGGATAAGGTACGGCC 1031898
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| | |||||| ||||| || || | | ||| |||||||| || || ||||||||
Sbjct 1031899 ATCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCCTT 1031958
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|||||||||||| |||||||||||||| || ||||| || || ||||||||||| ||
Sbjct 1031959 ATCTTGAATCTTGGCTTTTACATTTTCGATTGTATCCGATGGCTCGACTTCCAAAGTGAT 1032018
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || || || | ||||| || || || |||||
Sbjct 1032019 CGTTTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1032054
Score = 143 bits (158), Expect = 5e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| | ||| || |||| || ||||| || || || || ||||| |
Sbjct 1032054 TACCACCACGGAGACGTAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGG 1032113
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | |||| || ||||| | ||| ||||| |||||||| | || ||| |||||||| |
Sbjct 1032114 ACAAAGTTCTTCCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGG 1032173
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| ||||| || || || || || || |||||||||||||| ||||||||| || || |
Sbjct 1032174 GAATTCCCTCTTTGTCCTGGATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGA 1032233
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||| || || || || || || | || || || || || |||||
Sbjct 1032234 CTTCCAATGTAATAGTTTTACCGGTAAGAGTTTTGACGAAAATTTGCAT 1032282
Score = 138 bits (152), Expect = 2e-27
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | || |||| || | || || || |||||||| || || || ||||| |
Sbjct 1032510 TACCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCG 1032569
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | ||| || ||||| || ||||| ||||| || || | | ||| || ||||| |
Sbjct 1032570 ACAATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTG 1032629
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| |||||||| || ||||| || || || || ||||||||||| ||||| ||||| |
Sbjct 1032630 GAATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCA 1032689
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||| || || || || || ||||| || || ||||| ||||||||
Sbjct 1032690 CTTCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
Score = 91.5 bits (100), Expect = 3e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| |||||||| || || ||||| ||||||||||| ||||| ||||| |||
Sbjct 1032919 ATACCTTCTTTATCTTGGATTTTGGCTTTCACATTTTCAATTGTATCTGATGGTTCAACT 1032978
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||||| || || || || || ||||| || || ||||| || ||||||
Sbjct 1032979 TCCAATGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATTTGCATT 1033026
>seq558
Length=611125
Score = 116 bits (128), Expect = 7e-21
Identities = 166/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 82580 CCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATC 82639
|| ||| || | || ||||| || ||||| | ||| || |||||||| || || || ||
Sbjct 303944 CCAACCGCCGCGCAGTCGCAGTACCAAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTC 303885
Query 82640 AGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGG 82699
| || | | ||||| || || || || || |||||||| | | || || || ||
Sbjct 303884 CGCGAGCGTGCGTCCGTCGTCGAGCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGG 303825
Query 82700 AGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTC 82759
|| || || || || || || ||||| ||||| || | || ||||| || || || ||
Sbjct 303824 CGGAATGCCCTCTTTGTCCTGGATCTTAGCTTTGACGCTCTCGATCGTGTCGTTTGGGTC 303765
Query 82760 TACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813
||||| | ||||| ||||||| || | ||||| |||||||||||||| ||
Sbjct 303764 CACTTCGAGCGTTATGTTCTTGCCCGTGAGTGTCTTGACAAATATCTGCATCAT 303711
>seq657
Length=2482312
Score = 100 bits (110), Expect = 6e-16
Identities = 237/354 (67%), Gaps = 3/354 (1%)
Strand=Plus/Plus
Query 143935 TTCCTATTTATACAGATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCAGTCT 143994
|||| |||| | |||| |||||| ||| | | |||| | |||| ||||| ||
Sbjct 292211 TTCC-ATTTTTCGAGATGCAGATGAATGGTCAAAATGGAGACAAATGGGTGATCCTGTAC 292269
Query 143995 TGCATATAGAACTTAGGAGATGGGCTGATGTTTTTATTATAGCGCCCTTAACAGCAAATA 144054
| ||||| ||| | || | ||||| ||| || | || ||||| || ||||| |
Sbjct 292270 TTCATATTGAATTAAGAAATTGGGCCGATATTGGCGTGATTGCGCCATTGGATGCAAACA 292329
Query 144055 CGTTAGCAAAAATAGCCAATGGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCT 144114
| | | ||||||| | || ||||| || |||||||| | | |||| || | || |
Sbjct 292330 CAATGGGAAAAATATCTAACGGTATTTGTGATAATTTGGCTTCTTGTATAATACGCGCTT 292389
Query 144115 GGGATATAAATAAACCTCTTATTTTTTGCCCCG-CTATGAATACCCTTATGTGGGAACAT 144173
||||||| ||||||| || || ||||| ||| ||||||| ||||||| | |||
Sbjct 292390 GGGATATGAATAAACAGCTG-TTATTTGCACCGGCTATGAACGTTTATATGTGGAATCAT 292448
Query 144174 CCTATTACAGAAAAACATATAGATACTTTAAAACATATGGGTTTCATAGAAATAGAATGT 144233
|| || || |||||| || | ||||||| | | || | || |||| | |
Sbjct 292449 CCGATAACGGAAAAATGCATTAAAGTTTTAAAAGAATTAGGCTATATTCAAATTGGACCG 292508
Query 144234 ATAGaaaaaaaaCTAGCCTGTGGAGACGTAGGAAATGGTGCTATGGCAGAAGTT 144287
|| || || ||||||||||| || |||| || || ||||||||||||
Sbjct 292509 ATTTCTAAGAAGCTAGCCTGTGGTGATTATGGAATGGGAGCCATGGCAGAAGTT 292562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981810569688158
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