Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq657 102 1e-16
>seq657
Length=2482312
Score = 102 bits (112), Expect = 1e-16
Identities = 235/353 (67%), Gaps = 1/353 (0%)
Strand=Plus/Plus
Query 142954 TTCCTATTTATACAGATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCCGTCT 143013
|||| |||| | |||| |||||| ||| | | |||| | |||| ||||| ||
Sbjct 292211 TTCC-ATTTTTCGAGATGCAGATGAATGGTCAAAATGGAGACAAATGGGTGATCCTGTAC 292269
Query 143014 TGCATATAGAACTTAGGAGATGGGCGGATGTTTTTCTTATAGCGCCCTTAACGGCAAATA 143073
| ||||| ||| | || | ||||| ||| || | || ||||| || ||||| |
Sbjct 292270 TTCATATTGAATTAAGAAATTGGGCCGATATTGGCGTGATTGCGCCATTGGATGCAAACA 292329
Query 143074 CGTTAGCAAAAATAGCCAACGGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCT 143133
| | | ||||||| | |||||||| || |||||||| | | |||| || | || |
Sbjct 292330 CAATGGGAAAAATATCTAACGGTATTTGTGATAATTTGGCTTCTTGTATAATACGCGCTT 292389
Query 143134 GGGATATAAATAAACCTCTTATTTTTTGTCCCGCTATGAATAGCCTTATGTGGGAACATC 143193
||||||| ||||||| || | ||| || |||||||| ||||||| | ||||
Sbjct 292390 GGGATATGAATAAACAGCTGTTATTTGCACCGGCTATGAACGTTTATATGTGGAATCATC 292449
Query 143194 CTATTACAGAAAAACATATAGATGCTTTAAAACATATGGGTTTCATAGAAATAGAATGCA 143253
| || || |||||| || | | ||||||| | | || | || |||| | | |
Sbjct 292450 CGATAACGGAAAAATGCATTAAAGTTTTAAAAGAATTAGGCTATATTCAAATTGGACCGA 292509
Query 143254 TAGaaaaaaaaCTAGCCTGCGGAGACATAGGAAATGGTGCTATGGCAGAAGTT 143306
| || || |||||||| || || |||| || || ||||||||||||
Sbjct 292510 TTTCTAAGAAGCTAGCCTGTGGTGATTATGGAATGGGAGCCATGGCAGAAGTT 292562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903396271129920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |