Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq335 215 5e-51
seq558 114 1e-20
seq768 105 6e-18
seq1 98.7 1e-15
seq391 86.0 6e-12
>seq335
Length=939964
Score = 215 bits (238), Expect = 5e-51
Identities = 844/1300 (65%), Gaps = 89/1300 (7%)
Strand=Plus/Minus
Query 148112 CTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGAT-CGGGAATGCCGTCGATGC 148170
||| |||||||||| ||||||| ||||| ||| | | | ||||| | || |||||
Sbjct 180303 CTTGATCTCCCAGGTCGTCTTGAACAGCGCCTTCAGCGGCTGCGGGATTTCC-TCGATCA 180245
Query 148171 GCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGA 148230
|||||||||||||| |||||| | | ||| | || | |||| | || ||
Sbjct 180244 GCTGCACCGAGCCGTTGTGCGCGATGAGCTGCTGCTTCAGCGCCTCCGACCACAGCCCGA 180185
Query 148231 GCT-CGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289
||| ||| | | | | || | || || | ||| ||||||||| |||||||
Sbjct 180184 GCTTCGAGAGCGCGAGC-ACCAAGTGCTTGTTGAGCACGCAGAACTCGCCGCTGAGCACG 180126
Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349
|| ||| | ||||||| ||| |||| || ||||||||| ||| || | ||||||
Sbjct 180125 CGGCGCGTAAACACGTTCGACGTGTACGGCTCGAACGACTCGCAGTTCCCGAGGATCTGC 180066
Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409
| |||| ||||| ||||| ||| |||||||| |||||||| ||| ||
Sbjct 180065 GAAGTCGACGCCGTCGGCATCGGCGCGACCAGCAGGCTGTTGCGCAGCCCGTACTTGACC 180006
Query 148410 ATT---TTGCGCTTCAGAGCCGCCCAGTCCCA---------GAGCGG------------- 148444
|| | |||| || || |||||||||| |||| |
Sbjct 180005 ATCGCCTCGCGC---AGCTCCTCCCAGTCCCACATGCCCGAGAGCTGAATCTCACGCAAG 179949
Query 148445 ---------CGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGG 148495
|| || | | ||||||||| |||| |||| | |||| ||| |||||
Sbjct 179948 TTCCGCTCGCGCCGTTCTT-CGTTCCACAAGTCGAACTGGAATTTGCCTTCGCTCGCGGG 179890
Query 148496 GCTGCCCTCGTA-CGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGA 148554
||| ||| | | || |||||| |||||| || ||| || ||| |||||| |
Sbjct 179889 CGAGCCTTCGAAGCTCGC-GTACGGCCCGTGCTCCTTCGCGAGCTCGACGCTCGCGGTCA 179831
Query 148555 GCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGC-CGCCGACTCGCTT 148613
||||||| |||| ||||||||| || | | |||| | | || |||| |||
Sbjct 179830 CCGCGCCGAAGTAGATCGTCTCGAAGATGTTCTTGTTCA-CTTCGTTCGCCTCGGGGCTG 179772
Query 148614 TCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATG 148673
||| |||||| |||||| || | |||||| || | ||| || ||||| | ||| ||
Sbjct 179771 TCGAACGGCAGCCGCAGCAGCTGCAGCGCGTCCGCGAAGCCTTGCACGCCGATGCCGATC 179712
Query 148674 GGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGATAGTGGTTGCGGTCGATG 148733
|||||||| | |||| | | ||||| ||||| | ||| | ||||||
Sbjct 179711 GGCCGGTGCCGCAGGTTGCTGCGCCGCGCCTTCTCGGTCACGTAGAAGCCCACGTCGATC 179652
Query 148734 ATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTAC 148793
| |||| || || || ||| | ||| | | | |||| ||| |||||
Sbjct 179651 ACGTTGTTCAGGTTCTGCGTCACGATCTTCGCGACCTCGAACAGC--TTC----TCGTAG 179598
Query 148794 TTGTCATCTACGATGCATCG--GTTCACG----------GCGATAGAG--GCTAGATTGC 148839
||| | | || | | ||| || |||| |||| || | || || ||||
Sbjct 179597 TTGA-AGCGCCGCTTC-TCGACGTCCACGTACGCGGGCAGCGACAGCGACGCGAGGTTGC 179540
Query 148840 ACACGGCCGTCTCATC-CGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCAT 148898
|||| || |||| || || | || |||||| || | || | |||||| || | |
Sbjct 179539 ACACCGCGATCTCCTCGCGCGACG-TGTACTGCACCACTTCCGTGCACAGGTTCGAGGAC 179481
Query 148899 TTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATG 148958
| ||| ||| | |||| || || ||||| |||||||||||||||||||| || |
Sbjct 179480 TGGATGGTGCCGAGGTTCCGCTGGTTCGACTTGCGGTTGCACGCGTCCTTGTACACCAAG 179421
Query 148959 TACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGATGCAGGTCCTGCGCGC-- 149016
||||| ||| || || | |||||| | ||| ||| |||| | ||| | ||||||
Sbjct 179420 TACGGATTGCCCGTCTCGATCTGCGTGTTCACAATG-ACCG-TCCAGAGCGCGCGCGCCT 179363
Query 149017 GCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCT 149076
||| ||| || || |||| ||| |||||| || |||||| |||||| ||
Sbjct 179362 TCACCTGCCGCACGAAGCGCTGCTCGGCCTCGTAGCGCGTGTACAGCGCGTCGAACTCCG 179303
Query 149077 CGCCGTAGCAATCG-TCGAGACCGGGGCACTTGTGCGGG-CACATGAGCGACCACACGCC 149134
|||| || ||| | || |||| | || || ||||| ||||| || |||||||||
Sbjct 179302 CGCCCCAGACTTCGAACAAGCCCGGCG-AC-TGCGCGGGACACATCAGACTCCACACGCC 179245
Query 149135 GTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCG 149194
||| ||| |||||| ||| |||| ||| | | ||| | | |||||| ||
Sbjct 179244 GTCTTCGTCCACGCGGCGCATGAACAAGTCGTTGATGTACAGCCCCAGGAAGAGGTCCCG 179185
Query 149195 CGCCTTGC---AGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGA-GCACGCTGAATATGT 149250
|| ||| | |||||| ||| |||||| ||||| | || | || | ||| ||||
Sbjct 179184 CG---TGCGCAACTCTTCGTTGCCGTGGTTGCGCCGCAGCTCGATGAACTC-GAAGATGT 179129
Query 149251 CCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTT---GCCGCCCTGGT 149307
| |||||||||||||| | ||| | ||||| |||| |||||||| |||||||||||
Sbjct 179128 CTGCGTGCCACGGCTCCAGGTAGATCGCGAAGCCGCCTTTGCGCTTGCCGCCGCCCTGGT 179069
Query 149308 CGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGG 149347
|||||| |||| | | ||| ||||| || | ||| ||
Sbjct 179068 CGACGTAGCGCGCGGTCGCGTTGAACACGCGCAGCATCGG 179029
>seq558
Length=611125
Score = 114 bits (126), Expect = 1e-20
Identities = 151/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
|| || || |||||||||||||| || ||||| || | | |||| ||| ||||||
Sbjct 303919 AAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGCGAGCGTGCGTCCGTCGTCGAGC 303860
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| ||||| | || | ||||||||||| || || ||||| || ||||| ||||
Sbjct 303859 TGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGGAATGCCCTCTTTGTCCTGGATC 303800
Query 133575 TTTTGCTTGA-GCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
|| |||| ||| ||| | ||||||| | || ||||| |||| || | | | |||||
Sbjct 303799 TTAGCTTTGACGCT-CTCGATCGTGTCGTTTGGGTCCACTTCGAGCGTTATGTTCTTGCC 303741
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || || || ||||||||
Sbjct 303740 CGTGAGTGTCTTGACAAATATCTGCAT 303714
>seq768
Length=1243675
Score = 105 bits (116), Expect = 6e-18
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
|| || || || ||||| || || || ||||| || | | |||| | ||| || | |
Sbjct 1130717 AAGTGGATCGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGCGTGCGCCCGTCATCCAAC 1130776
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || || |||| || ||||||||||| || || ||||| |||||||| ||||
Sbjct 1130777 TGCTTCCCGGCAAAAATCAGACGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATC 1130836
Query 133575 TTTTGCTTGA-GCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
|| |||| ||| ||| | ||||||| | || ||||| || | ||||| | | || ||
Sbjct 1130837 TTAGCTTTGACGCT-CTCGATCGTGTCGTTTGGGTCCACCTCAAGGGTGATGTTCTTCCC 1130895
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || ||||| || |||||
Sbjct 1130896 CGTGAGCGTCTTCACGAAGATTTGCAT 1130922
>seq1
Length=3593316
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATC-GCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
|| || ||||| || || |||||||| | | || | | | | || || ||||| |||||
Sbjct 1032542 GTCGATTCTTTTTGAATGTTGTAATCCGACAATGTTCGGCCA-TCTTCAAGCTGTTTGCC 1032600
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | || |||||||| || || || ||||| ||||| ||| || |||
Sbjct 1032601 AGCGAAAATCAAACGTTGCTGGTCTGGTGGAATTCCTTCTTTGTCTTGGATTTTAGCCTT 1032660
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | |||| || || | ||| ||||| || | || | |||||| || |||| |||
Sbjct 1032661 GACATTTTCAATGGTATCCGAGGGTTCCACTTCCAATGTAATGGTTTTACCAGTCAAAGT 1032720
Query 133643 TTTTACGAAAATCTGCAT 133660
||| || |||||||||||
Sbjct 1032721 TTTGACAAAAATCTGCAT 1032738
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||||| || || ||||| || || || |||||| || || ||| | || || |
Sbjct 1031621 AAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGACAATGTTCGACCA-TCTTCCAA 1031679
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|| || || || | || | |||||||| || || || || ||||| ||||| |||
Sbjct 1031680 TTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGAATACCTTCTTTGTCTTGGAT 1031739
Query 133574 CTTTTGCTT-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||||||| || | || | || || | || ||||| || | ||||| |||||| |
Sbjct 1031740 -TTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCCACTTCCAAGGTGATGGTTTTAC 1031798
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||| |||||||||||||| |||||
Sbjct 1031799 CGGTCAATGTTTTTACGAAAATTTGCAT 1031826
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATC-GCCCATCGTGGACGAGTCCTCGAG 133513
||||||| |||||| ||||| |||||||| ||||| | | || | | | | || |||||
Sbjct 1033048 AAATGTAAGGTGGATTCTTTTTGTATATTATAATCCGACAATGTTCGGCCA-TCTTCGAG 1033106
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|| || || || | || | || ||||| || || || || ||||| || || |||
Sbjct 1033107 TTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTTATCCTGGAT 1033166
Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| | | || | ||||| | || || || || | || | ||||||||
Sbjct 1033167 -TTTAGCTTTCACATTTTCGATAGTGTCCGATGGTTCGACTTCCAAAGTAATGGTTTTGC 1033225
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| |||| ||||||||||||||| |||||
Sbjct 1033226 CAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
>seq391
Length=841353
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/208 (70%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| || ||||| |||||||| || ||||| ||| | ||| ||| || ||
Sbjct 730847 AAATGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGATAAAGTGCGGTTGTCGTCTAGT 730906
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || || |||| || | ||||| || || || || ||||| ||||| |||
Sbjct 730907 TGCTTACCAGCAAAAATAAGTCTTTGCTGATCCGGGGGAATTCCTTCTTTGTCTTGGAT- 730965
Query 133575 TTTTGCTTGAGCTG--CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| || | || ||||| ||||| | || ||||| || | ||| | | | || |
Sbjct 730966 -TTTGGTTTTGATGGACTCAATAGTGTCATTTGGTTCCACCTCCAGGGTAATGTTCTTCC 731024
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || | ||||| ||||||||||||||
Sbjct 731025 CTGTTAATGTTTTCACGAAAATCTGCAT 731052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483412811471280
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