Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq569 295 2e-74 seq1 293 6e-74 seq1101 165 2e-35 seq757 131 4e-25 seq456 120 7e-22 seq391 96.9 8e-15 seq413 86.0 1e-11 >seq569 Length=351751 Score = 295 bits (326), Expect = 2e-74 Identities = 450/636 (71%), Gaps = 9/636 (1%) Strand=Plus/Plus Query 110510 ACAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGA 110569 |||| || | || || || || || ||| ||||||| ||||||||| || ||||| Sbjct 123308 ACAAATGTCATCCTGTTTCCTGTTAACAATGTCCGATGATAGTATTGAAGGAATATATGA 123367 Query 110570 TGCTCTTAAAGAAACTGCTCTTATTTCTAAAAACT-CTGGAGGAATTGGTATTCACGTTC 110628 | | | ||| ||| || |||| |||| || |||| || |||||| | | || | Sbjct 123368 TACATTAAAACGTTGTGCAATTGTTTC-AAAATCTGCTGGTGGTATTGGTTTAAATGTAC 123426 Query 110629 ATGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTG 110688 || |||||| ||| ||||| || |||| || | || ||| ||||| |||||| | Sbjct 123427 ATTGTATTCGTTCACAAGGATCATATATTGCTGGTACTAATGGTTTTTCAAATGGACTCG 123486 Query 110689 TTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAA 110748 ||||||||||| | || || || | || ||| ||||| ||||||||||| | | Sbjct 123487 TTCCAATGTTACGTGTATTTAATAATACAGCACGTTATGTTGATCAAGGTGGTGGAAAAC 123546 Query 110749 AT---GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAG 110805 | || |||||||||||||||| ||||| ||||||||||||||||||| ||| |||| Sbjct 123547 GTCCAGGTGCATTTGCTATCTATCTAGAACCATGGCATTCAGATATATTTGCATTTTTAG 123606 Query 110806 AACTTCGTAAA--AATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAAT 110863 | || | ||| ||| || | |||||| | | ||||||||| |||| |||||| | Sbjct 123607 A--TTTGAAAAAGAATACTGGTTCGGAAGAATTACGTGCACGTGATCTATTCTATGCATT 123664 Query 110864 GTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTG 110923 ||||| | |||||||| |||||||||||| || ||| |||||||| | ||||| Sbjct 123665 ATGGATACCGGATTTATTTATGAAACGTGTTGAAATGGATGCAATGTGGTCATTAATGTG 123724 Query 110924 TCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGA 110983 ||| || | |||||||||| |||| | || |||| |||||| | | || || Sbjct 123725 TCCGAATGAATGTCCTGGTCTACATGATTGTTGGGGTGAAGAATTTGAACAATTATATGA 123784 Query 110984 AAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAA 111043 |||||||||| ||||| | | | |||| | ||| || || | ||||| Sbjct 123785 AAAATATGAACGTGAAGGTCGTTATAGGCAACAGGTAAAAGCACATCAATTATGGTTTGC 123844 Query 111044 AATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAA 111103 ||| | || ||||| ||||||| || ||||| ||||| || || ||||||||| ||| Sbjct 123845 AATATTAGATGCACAAATTGAAACCGGTACTCCATATATGTTATACAAAGATCATTGTAA 123904 Query 111104 TCGCAAATCTAATCAAATGAATTTAGGAACAATTAA 111139 ||| ||||| |||||| ||| | || |||||||| Sbjct 123905 TCGTAAATCAAATCAACAAAATCTTGGTACAATTAA 123940 >seq1 Length=3593316 Score = 293 bits (324), Expect = 6e-74 Identities = 535/780 (69%), Gaps = 5/780 (1%) Strand=Plus/Plus Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 ||| | ||||| || ||||| | ||| ||| |||||||||||| | |||||||| | Sbjct 3536441 GAAAGACCTCAGCATATGTTGATGCGTTGTGCTATTGGTATTCATCGTGATGATATTGAT 3536500 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 |||| |||||| ||| || | || |||| || ||||| | ||||| Sbjct 3536501 GCTGCCATTGAAACATATAATTTGATATCGGAAAATTGGTTTACACATGCATCACCTACG 3536560 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543 | || || || ||||| || | ||||| | || || ||||| || || | Sbjct 3536561 TTGTTCAATGCCGGAACAAAACGGCCGCAATTATCATCATGTTTTCTGCTCACTATGAGT 3536620 Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAAC 110603 |||||| ||||||||||| |||||| | |||||| || ||| | || || ||| Sbjct 3536621 GATGATAGCATTGAAGGTATATATGATACGCTTAAACAATGTGCCATCATCTCAAAATCA 3536680 Query 110604 TCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACA 110663 |||| || |||||| || | ||||| ||| || || || |||| || Sbjct 3536681 GCTGGTGGCATTGGTCTTAATATTCATTGTATCCGATCTTCTGGTAGTTATATTGCCGGT 3536740 Query 110664 GCGAAGGGTGCTTCAACTGGACTTG-TTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722 | || || || | ||| |||| |||| ||| || | || | ||| | ||||| Sbjct 3536741 ACAAATGGAATCTCTAATGG-CTTGATTCCTATGCTACGCGTATACAATAATACTGCTCG 3536799 Query 110723 ATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCTTG 110779 |||||| ||||||||||||| | | | || ||||||| |||||||| ||||| || Sbjct 3536800 ATATGTTGATCAAGGTGGTAACAAACGTCCTGGAGCATTTGCCATCTATCTGGAACCATG 3536859 Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAG 110839 |||||| ||||| ||||| || || ||||| |||||| || | || |||| | | Sbjct 3536860 GCATTCTGATATCTTTGATTTTCTAAGTCTTCGCAAAAATACCGGTTCGGAGGAACTACG 3536919 Query 110840 AGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGA 110899 |||||||||||||||||||| | |||||| | ||||||||||||||||| || | | Sbjct 3536920 TGCACGTGATTTATTTTATGCTCTATGGATTCCTGATTTATTCATGAAACGCGTAGATCA 3536979 Query 110900 AAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGG 110959 | |||| |||||||| | |||||||| ||| | ||| || ||| |||| | || Sbjct 3536980 AGATGGAATGTGGTCATTGATGTGTCCGCATGAATGTCCCGGGTTATTTGATTGTTGGGG 3537039 Query 110960 AAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAAT 111019 |||| |||||| | ||||| ||| |||||||| ||| | ||| |||| Sbjct 3537040 TGAAGAATTTGAAAAACTTTATGAAGGTTATGAAAATGAAAAACGATATCGATCACAATG 3537099 Query 111020 TCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTA 111079 || |||| | |||||||| || |||||||||||| | ||||||||||| || || Sbjct 3537100 TCGTGCTCGTGTTCTTTGGTTTGCTATTCTTGAATCACAAATCGAAACTGGAACACCATA 3537159 Query 111080 TATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAA 111139 || | || ||||||||| |||||| ||||| |||||| ||| | || ||||| || Sbjct 3537160 CATGGTTTACAAAGATCATTGTAATCGAAAATCAAATCAACAAAATCTCGGTACAATCAA 3537219 Score = 179 bits (198), Expect = 9e-40 Identities = 383/572 (67%), Gaps = 0/572 (0%) Strand=Plus/Plus Query 131435 TTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTCTGG 131494 ||||||||| || |||| ||| ||| ||||| || ||| ||| || | || ||| Sbjct 929252 TTTCCAATTCAATATCATGATATTTGGACAATGTACAAAAAAGCTGAAGCATCATTTTGG 929311 Query 131495 ACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACCTTGAAT 131554 || |||||||| | ||| | | | | ||| ||| ||||| | ||||||| | |||| Sbjct 929312 ACAGTTGAAGAAGTAGATCTAAGCCATGATCTTGTACATTGGAATAAATTAAATTCGAAT 929371 Query 131555 GAAAAAGATTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGCATTGTTATT 131614 |||||| |||| |||| | || | || || || || | ||||||||| ||||||| | Sbjct 929372 GAAAAACATTTCATTTCACATGTATTGGCTTTTTTTGCTGCAAGTGATGGTATTGTTAAT 929431 Query 131615 GAAAATCTTGTTATTAATTTCATTCAAGAAATTGATATTCCTGAAGTAACATCGTTCTAC 131674 |||||| | | | ||| |||| || | | || || |||| | | || || Sbjct 929432 GAAAATTTAGCTGAACGTTTTATTCGTGATGTACAAATACCAGAAGCACGTTGTTTTTAT 929491 Query 131675 ACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTATTGATTGAGAGT 131734 ||||||| ||| | ||| | ||||| || |||||||||||||||||| | | Sbjct 929492 GGATTTCAAATTGCTATCGAAAATGTTCATTCAGAAATGTATTCATTATTGATTAATACC 929551 Query 131735 CTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAATAAATTTCCTGCA 131794 ||| || |||| || || |||| ||||| || ||| | ||| Sbjct 929552 TATGTATCGGATCGTAATGAACAAGATTTTCTATTCAATGCTATACGTAATCTACCTTGT 929611 Query 131795 ATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCT 131854 | | || ||||| |||||||||| |||| ||||||||||| | || ||| | Sbjct 929612 GTAGAGAAAAAAGCTAAATGGGCTATACGTTGGACACAAGATGATTCGGTTACATTTGCC 929671 Query 131855 ACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCT 131914 | | | | || |||||| ||||||||| ||||| ||||| ||| | || || Sbjct 929672 GAACGTTTAATTGCATTTGCTGCTGTTGAAGGAATATTTTTTTCCGGTTCATTTGCAGCA 929731 Query 131915 ATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATC 131974 || |||||||| || || ||||| | |||||||| || | || || ||| |||| || Sbjct 929732 ATTTTTTGGCTAAAAAAACGTGGCCTAATGCCTGGTCTTACCTTTTCAAATGAATTGATT 929791 Query 131975 TCGAGAGATGAAGCATTGCATACTGAATTTGC 132006 || | ||||||| ||| ||| ||| ||||| Sbjct 929792 TCACGTGATGAAGGATTACATTGTGATTTTGC 929823 >seq1101 Length=1082900 Score = 165 bits (182), Expect = 2e-35 Identities = 299/433 (69%), Gaps = 7/433 (2%) Strand=Plus/Plus Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT--AAGA-GA 110747 || ||| | | ||| ||||| || || || ||||| | ||||||||| |||| || Sbjct 175251 CCTATGCTCAAAGTTTTCAATGAAACCGCCCGTTATGTCGACCAAGGTGGTGGAAGACGA 175310 Query 110748 AATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807 || ||| ||||| | ||||| || || ||||||| ||||| || |||||||||||| Sbjct 175311 AAGGGCGGCTTTGCAGTATATCTGGAGCCATGGCATTTGGATATTTTCGAATTCTTAGAA 175370 Query 110808 CTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGG 110867 || |||||||| ||| ||||||| | || || ||||| || || ||| ||||| Sbjct 175371 CTAAAAAAAAATCACGGACATGAAGAAGCTCGTGCTCGGGATTTGTTCTACGCATTGTGG 175430 Query 110868 ATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCT 110927 ||| | ||||| || |||||| | || | || | || ||| || |||||||| Sbjct 175431 ATTCCTGATTTGTTTATGAAAAGAGTAGACCAAGACAGCTACTGGAGCCTCATGTGTCCG 175490 Query 110928 CATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAA 110987 || | || || |||||| || || | || ||| |||| || | || |||||| | Sbjct 175491 CACCAATCACCCGGTCTACACGAGGTTTGGGGGAAAAAGTTCGAGAAACTCTACGAATCA 175550 Query 110988 TATGAAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATC 111047 |||||||||||||| | ||| ||||| ||||| ||||||||| | ||| Sbjct 175551 TATGAAAAAGAAGGTCGATACATCAAGCAAATCAAAGCTCGTGAACTTTGGATGGCAAT- 175609 Query 111048 CTTGAATCA--CAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATC 111105 || | ||| ||| | |||||||||| || ||||| | | ||||||| |||| Sbjct 175610 -TTTAGTCACTCAAATGGAAACTGGAAACCCCTATATGGTTTTTAAAGATGCCGCAAATC 175668 Query 111106 GCAAATCTAATCA 111118 | || ||||| || Sbjct 175669 GAAAGTCTAACCA 175681 >seq757 Length=524386 Score = 131 bits (144), Expect = 4e-25 Identities = 358/536 (67%), Gaps = 12/536 (2%) Strand=Plus/Minus Query 279804 AAGAATTTATTGATAAAGAACTGATCCATTTTTCTAATTATGATGTTCATCGTTCTATTC 279863 |||| ||| | | |||||| | |||| || |||| ||| | | |||||||||| Sbjct 431081 AAGATTTTGTCAACAAAGAATTAATCCTATTCAGTAATATGGATAATGAACGTTCTATTC 431022 Query 279864 CTCATTTAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAA 279923 || || ||||||| ||||||||| || ||||| | |||| | |||||||||| Sbjct 431021 CTTCGTTGGTGGATGGATTGAAACCTGGCCAACGTAAAGTGTTATTTACTTGTTTCAAAC 430962 Query 279924 GAAAATTGGTAAA--GGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGC 279981 | || || |||| ||| || || ||||| ||||| |||| || |||||| Sbjct 430961 GTAA--TGATAAACGTGAAGTTAAAGTGGCTCAATTAGCCGGTTCGGTCGGCGAACATAG 430904 Query 279982 AGGTTATCATCACGGTGAAGCGTCTCTTCAAGGTG-CTATTGTAGGTCTTGCCCAAGATT 280040 | ||||||||| ||||||| || ||| | | | | || || | | || ||| ||| Sbjct 430903 TGCTTATCATCATGGTGAAGTATCACTT-ATGTCGACAATCATAAATTTGGCACAAAATT 430845 Query 280041 TTATGGCTTCAAACAACTTAAATCTGCTTTCACCAAATGGTCAATTTGGTTCTCGTATTC 280100 || | | ||||| | || | | | ||| | ||||||||| ||| | || ||| Sbjct 430844 TTGTCGGAAGTAACAATATTAACTTATTGTTACCGATTGGTCAATTCGGTACACGACTTC 430785 Query 280101 ACAATGGAAAAGATCATGGTAGTGCTCGTTACATACATA-CATGTCTTTCAGATATTACA 280159 | ||| |||||| || ||| ||||||| ||| | |||| ||| | | || Sbjct 430784 AAGGTGGCAAAGATGCTGCCAGTCCTCGTTATATATTCACCATG-CTTAATACTGTAGCA 430726 Query 280160 AACAAGTTATTT-ATCAATTCTGATAATGCTTCATTAGAGTGGCTAGAGGATGATGGTCT 280218 | || |||||| ||||| ||| || | | ||| | | || | |||||| ||| Sbjct 430725 AGGAAATTATTTCCACAATT-AGATGATCCATTATTGAATTATCTTTATGATGATAATCT 430667 Query 280219 TGCTATTGAACCAACATATTATGCTCCAATTATCCCTATGATTCTTGTTAATGGTGCTCA 280278 ||||||||| |||||||| ||||||||| || ||| || | || ||||| || | Sbjct 430666 AAAAATTGAACCAGAATATTATGTTCCAATTATTCCAATGGTTTTGGTCAATGGAGCCGA 430607 Query 280279 AGGAATTGGAACAGGTTATTCTACATCTA-TCCCAATGTACAATCCAATTGATATT 280333 ||| ||||| || |||| |||| | ||||||| || ||||||| || ||| Sbjct 430606 AGGTATTGGTACTGGTTGGAGTACAAAAATTCCCAAT-TATAATCCAAGGGAAATT 430552 Score = 95.1 bits (104), Expect = 3e-14 Identities = 390/596 (65%), Gaps = 42/596 (7%) Strand=Plus/Minus Query 278678 GAGGAATTTAAACAAGTATCTTTTGTTAATGGTATTAATACTTCAAAAGGTGGAAAACAT 278737 ||||| ||| ||||| | |||||| ||| ||||| || || ||||| |||||| Sbjct 432314 GAGGA-TTTCAACAAATCAGTTTTGTCAATAGTATTGCAACAACACGTGGTGGTAAACAT 432256 Query 278738 GTTGATTATGTTCTTAATAAGATTGTGAAGAAGATTTCAGAGATAATTGAGAAGAAGGAA 278797 |||||| ||||| || | ||||| || || | | || | ||| | ||||| | Sbjct 432255 GTTGATCATGTTTCCGATCAAATTGTTAATAAAGTGACCGATGTTATTAAAAAGAAAAAT 432196 Query 278798 AAGATT------AAGGTAAAATCAAATAATATTAAAGAACACTTGTTTATATTTGTAAAT 278851 ||| || | |||||| || | ||| | || | | ||||||| ||| Sbjct 432195 AAGGTTGGCGTCACTGTAAAACCATTCCAAATTCGTAATCATCTTTGGGTATTTGTCAAT 432136 Query 278852 TGTTTGATTATAAATCCTTCATTTGATTCGCAAACGAAAGATTTCCTAACTACGA--TTA 278909 ||||| ||| ||||||| |||| ||||| ||||| ||||| ||||| || ||| Sbjct 432135 TGTTTAATTGAAAATCCTACATTCGATTCACAAACCAAAGA------AACTATGACATTA 432082 Query 278910 GCAGTAAA----TTCGGAAGTAAGTTTGATTTTGGA--GATAAGTTTTATCGTGAT-TTA 278962 ||| || || ||| | | || | | ||||| |||| | | || || Sbjct 432081 CAAGTGAAAAGTTTTGGA--TCAACCTGTTCACCAACTGATAAATTTTTTAATAATGTTT 432024 Query 278963 GCAAAAACAGATATTATC-AAGAA-TATTATCAATACTCATAATTTTAAAG---AGAATA 279017 |||| | | |||| | ||| | | |||||| || | || |||| | ||| Sbjct 432023 TCAAAGTCGG-TATTGTTGAAGCAGTTTTATCATGGGCCAAA--TTCAAAGCTCAAAATG 431967 Query 279018 AGCTAACAAATAAAAAGAATGATGGCAAGAAGACCAATAAATTATA-TGGTATTCCAAAA 279076 ||||| |||| |||| | | ||| ||| || || ||| || |||||| || ||| Sbjct 431966 AGCTATCAAA-AAAATG--TCATG-CAAAAAAACATGCAAAGCTTACTGGTATCCCTAAA 431911 Query 279077 CTTGATGATGCAAACTGGGCTGGAGGTCGTAAATCTCAA--GAATGTGCTTTATTTCTTA 279134 || || ||||||||| |||||| | ||| ||||| || ||| | || |||| | Sbjct 431910 CTGGAGGATGCAAACGATGCTGGAACTA--AAAACTCAATCGATTGTACACTAATTCTAA 431853 Query 279135 CTGAGGGAGATTCTGCTGCTACATTTGCGATTGCTGGTTTATCTGTTATTGGTCGTGATA 279194 |||| || |||||||| | ||| ||||||| ||| ||| |||||||||||| Sbjct 431852 CTGAAGGTGATTCTGCCAAATCTCTTGTTGTTGCTGGATTAGGTGTAGTTGGTCGTGATA 431793 Query 279195 AATATGGCGTATTTCCTTTAAGAGGTAAAGTAATTAATGCTCGTGATAAAATCACA 279250 ||| ||| |||||||| | |||||||| | | |||| ||||| | |||||| Sbjct 431792 AATTTGGAGTATTTCCACTTCGAGGTAAAATGCTCAATGTACGTGA-AGCATCACA 431738 >seq456 Length=37656 Score = 120 bits (132), Expect = 7e-22 Identities = 180/256 (70%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCT 304945 ||||||| |||| | |||||||| | ||||||||||| | || || | ||| Sbjct 10990 TTACAATTTCATGTAGCAACATTTGTTGATAATGAAATACCGGGTATACCACGTGCACAA 11049 Query 304946 CAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGT 305005 |||| ||| || | || ||||| || | ||||| | |||| ||||| ||| | Sbjct 11050 CAAAAATCCGGTCGCCCATTAAAATCAATCAAACAACGTTTGAAAGCAAAAGAAGGTAGA 11109 Query 305006 ATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACACCT 305065 ||||| |||||||| ||||| ||||||||||||||| ||| ||| ||| || ||||| Sbjct 11110 ATTCGTGGTAATCTTATGGGTAAACGTGTTGATTTTTCTGCTCGAACTGTTATTACACCG 11169 Query 305066 GATTCTCAAATTAGTCTTCATGAATTAGGAGTTCCAATTGAAATTGCTTTAAAACTAACA 305125 ||| | | || || | ||||| | || |||||| | |||||| || |||||| Sbjct 11170 GATCCAAATCTTCGTATCGATGAAGTTGGTGTTCCACGTTCAATTGCACAGAATCTAACA 11229 Query 305126 TTTCCAGAGAAAGTTA 305141 ||||| || | |||| Sbjct 11230 TTTCCGGAAATTGTTA 11245 Score = 114 bits (126), Expect = 3e-20 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 305336 TTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTA 305395 || ||| | |||||| || | ||||||||| |||||||| ||||||| | |||||| Sbjct 11507 TTTAATCGACAACCAACATTACATAAAATGAGTATGATGGGTCATAAAATTCGTGTATTA 11566 Query 305396 TCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGAT 305455 | | | |||||||| || ||| || || || || |||||||| ||||||||| Sbjct 11567 CCATGGTCAACATTTCGTTTTAATTTATCTGTAACAACACCATATAATGCTGATTTTGAT 11626 Query 305456 GGAGATGAAATGAATATGCATGTACCTCAATCA 305488 || |||||||||||| |||||||||| |||||| Sbjct 11627 GGTGATGAAATGAATTTGCATGTACCACAATCA 11659 >seq391 Length=841353 Score = 96.9 bits (106), Expect = 8e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 || |||| ||| ||||| || |||||||| | ||||| || |||| || ||| | Sbjct 484972 CACTTGAGAGACGGTGATTATGTATTGTTCAATCGTCAACCTTCTTTGCACAAGATGAGT 485031 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTC-GATTAAATGTAAGTGC 305427 || |||| ||| | ||| || |||||| | | | | |||| || | ||| | |||| Sbjct 485032 ATCATGGGTCACAGAGTTAAGGTATTACC-GTACTCTAGTTTCAGAATCAATCTTAGTGT 485090 Query 305428 TTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487 | || |||||||| ||||| |||||||||||||||||||||||||| || ||||| Sbjct 485091 AACCTCTCCGTATAATGCCGATTTCGATGGAGATGAAATGAATATGCATGTTCCACAATC 485150 Score = 95.1 bits (104), Expect = 3e-14 Identities = 132/180 (73%), Gaps = 4/180 (2%) Strand=Plus/Plus Query 279064 TGGTATTCCAAAACTTGATGATGCAAACTGGGCTGGAGGTC-GTAAATCTCAAGAATGTG 279122 |||||| |||||| | ||||||||||| ||||| | || | | | |||||| Sbjct 401904 TGGTATACCAAAATTGGATGATGCAAATGATGCTGGTTCTAAGTTGAGCGCC-GAATGTA 401962 Query 279123 CTTTATTTCTTACTGAGGGAGATTCTGCTGCTAC-ATTTGCGATTGCTGGTTTATCTGTT 279181 | ||| | || || || ||||||||||| || | |||| ||||| |||||||||||| Sbjct 401963 CATTAATACTAACGGAAGGAGATTCTGCAAAAACCAGTTGC-ATTGCAGGTTTATCTGTT 402021 Query 279182 ATTGGTCGTGATAAATATGGCGTATTTCCTTTAAGAGGTAAAGTAATTAATGCTCGTGAT 279241 | || | ||||| ||||| |||||||| ||| | || ||| || |||||| |||||| Sbjct 402022 GTAGGCAGAGATAAGTATGGAGTATTTCCATTACGCGGAAAATTACTTAATGTACGTGAT 402081 Score = 87.8 bits (96), Expect = 4e-12 Identities = 128/178 (72%), Gaps = 10/178 (6%) Strand=Plus/Plus Query 304889 CAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCTCAA 304948 ||||| || ||||||| |||||| |||||||||| |||| ||| | | || | | Sbjct 484555 CAATACCACGTTGCAACTTTAATGAATAATGAAATCTCTGGTATTC--CTG---TCGCGA 484609 Query 304949 AGATCTG--GCAGA---CCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTC 305003 | | | | | | ||| | || |||||||| |||| | ||||| ||| | || | Sbjct 484610 CTACCCGTAGAAAAAAGCCTATCAAAGGTATTAGAGAACGATTAAAAGGAAAAAATGGGC 484669 Query 305004 GTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCAC 305061 || | |||||||| ||||||| || ||||| ||||||||||| |||| ||| ||||| Sbjct 484670 GTCTCAGAGGTAATTTAATGGGTAAGCGTGTAGATTTTAGTGCGAGAACTGTTATCAC 484727 >seq413 Length=522157 Score = 86.0 bits (94), Expect = 1e-11 Identities = 108/144 (75%), Gaps = 6/144 (4%) Strand=Plus/Plus Query 113739 GGTACATATATGTTATGCGTCGAAGTTTCAATCATTTCATACttttttttCGTAAAAATA 113798 ||||||| |||||||| || || | ||| |||||| ||||| || ||||||||| Sbjct 138143 GGTACATCAATGTTATGAGTTGACGGACAAATATCTTCATATTTTTTATTGGTAAAAATA 138202 Query 113799 TCTGTCGCAACAAAATGACACTTT-GCATGACCATGTTTTCCAGTTTTTGA--TGTTGAT 113855 ||| |||||| ||| ||||| ||||| |||||||| ||||||||||| || | || Sbjct 138203 TCTAAACCAACAAGATG-TACTTTAGCATGGCCATGTTTACCAGTTTTTGAAGTGCTCAT 138261 Query 113856 ATGGAATTTACTTTACACGGACGA 113879 | | | |||||||| |||||| Sbjct 138262 TTCCA--TGACTTTACATGGACGA 138283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186792697616442