Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 3e-21
>seq1
Length=3593316
Score = 118 bits (130), Expect = 3e-21
Identities = 138/184 (75%), Gaps = 2/184 (1%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| || || || ||||| || || |||||||| || ||||| || |||||
Sbjct 1032268 CAAAACTCTTACCGGTAAAACTATTACATTGGAAGTCGAGCCATCTGATACGATCGAAAA 1032209
Query 206244 AGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302
||||| || ||| || || || ||||| |||||| || || ||| || | ||||
Sbjct 1032208 TGTAAAAGCCAAA-ATCCAGGACAAAGAGGGAATTCCCCCAGATCAGCAACGATTGATCT 1032150
Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362
| ||||||||||| |||||||||||||| |||||| ||||||||||| | || || || |
Sbjct 1032149 TTGCCGGAAAGCAATTGGAAGATGGAAGAACTTTGTCCGATTACAACATTCAAAAGGAAT 1032090
Query 206363 CTAC 206366
| ||
Sbjct 1032089 CGAC 1032086
Score = 114 bits (126), Expect = 3e-20
Identities = 151/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || || ||||| ||||| |||||||||||| || || || |||||
Sbjct 1031811 AAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAACCATCGGATACTATCGAAAAT 1031752
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||||||| || ||||| |||||||| ||| || || || | | |||||
Sbjct 1031751 GTCAAAGCAAAA-ATCCAAGACAAAGAAGGTATTCCACCAGATCAGCAGCGTTTGATCTT 1031693
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||||| || ||||||||||| | || ||| ||||||| ||| |||| ||||| ||
Sbjct 1031692 TGCCGGAAAACAATTGGAAGATGGTCGAACATTGTCCGATTATAACATCCAAAAAGAATC 1031633
Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390
|| | || | || ||| |||||||
Sbjct 1031632 GACATTACATTTGGTATTGCGACTTCG 1031606
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| |||||| | || || ||||| || || |||||||||||| || ||
Sbjct 1032735 CAGATTTTTGTCAAAACTTTGACTGGTAAAACCATTACATTGGAAGTGGAACCCTCGGAT 1032676
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | ||| || ||| || || ||||| |||||||||||| || ||| |||
Sbjct 1032675 ACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGAATTCCACCAGACCAGCAA 1032616
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| | || ||||| || || ||| | |||||||| | || ||| | ||||||||| |
Sbjct 1032615 CGTTTGATTTTCGCTGGCAAACAGCTTGAAGATGGCCGAACATTGTCGGATTACAACATT 1032556
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| ||||| || || ||||| || || ||| ||
Sbjct 1032555 CAAAAAGAATCGACACTTCATCTCGTATTGCGA 1032523
Score = 102 bits (112), Expect = 2e-16
Identities = 134/183 (73%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || || ||||| |||||||||||||| ||| || ||||| |||||
Sbjct 1033466 AAAACATTGACTGGTAAAACCATCACTTTGGAAGTCGAACCATCGGACACCATCGAAAAT 1033407
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| ||| |||||||| |||||||| ||| || || ||| || | |||||
Sbjct 1033406 GTTAAAGCCAAA-ATTCAAGATAAAGAAGGCATTCCACCAGATCAGCAACGATTGATCTT 1033348
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || || || ||||||||||| | |||||| ||||||| || | || || || ||
Sbjct 1033347 TGCTGGTAAACAATTGGAAGATGGTCGTACTTTGTCCGATTATAATATTCAAAAGGAATC 1033288
Query 206364 TAC 206366
||
Sbjct 1033287 AAC 1033285
Score = 96.9 bits (106), Expect = 8e-15
Identities = 131/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || || |||||||||||||||||||| || || || ||| |||||
Sbjct 1032040 CAAGACCCTAACTGGTAAAACGATCACTTTGGAAGTCGAGCCATCGGATACAATCGAAAA 1031981
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
||||| ||||||||||| || ||||| ||| || || ||| | | || ||
Sbjct 1031980 TGTAAAAGCCAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAGCAACGTTTGATTTT 1031921
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || || || ||||||||||| | || || |||||||||| | || ||||| ||
Sbjct 1031920 CGCTGGTAAACAATTGGAAGATGGCCGTACCTTATCCGATTACAATATTCAAAAAGAATC 1031861
Query 206364 TAC 206366
||
Sbjct 1031860 CAC 1031858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181800782171562
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |