Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 2e-25
seq391 125 7e-24
seq335 111 1e-19
>seq1
Length=3593316
Score = 131 bits (144), Expect = 2e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||| || ||||| |||||||||| | | || |||||||| || || || || || ||
Sbjct 1033032 ACGTAAACGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCGACAATGT 1033091
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| ||||||||| |||||||| | | |||| | || || |||||||| || || ||
Sbjct 1033092 TCGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATACC 1033151
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||||||||| ||||| ||||| | ||| | ||| || | || || ||||| |
Sbjct 1033152 TTCTTTATCCTGGATTTTAGCTTTCACATTTTCGATAGTGTCCGATGGTTCGACTTCCAA 1033211
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | ||||| ||||||| |||||||| |||||| |||||
Sbjct 1033212 AGTAATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
Score = 125 bits (138), Expect = 7e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGT-CGCTCATGGTACGCGA 131967
||||| |||||||| | ||||||||||||| |||||||| | || | || |||||
Sbjct 1032296 CGCAATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCCGATAAT-GTACGACC 1032354
Query 131968 ATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTT 132027
|||||| | |||||||||| | |||| | ||| || || ||||| || || || |||||
Sbjct 1032355 ATCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGTGGAATTCCCTCTTT 1032414
Query 132028 ATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAG 132087
||| ||||||| |||| | ||| | ||||| | || || || || | || |
Sbjct 1032415 ATCCTGAATTTTTGCCTTCACATTTTCGATTGTATCAGATGGTTCAACGTCTAATGTGAT 1032474
Query 132088 CGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||||||||||| ||||| | |||||| |||||
Sbjct 1032475 GGTTTTACCAGTCAATGTTTTCACGAAAATTTGCAT 1032510
Score = 123 bits (136), Expect = 2e-23
Identities = 165/228 (72%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| |||||||| | |||| || |||||||| || || ||| || ||||| |
Sbjct 1033267 CGCAATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCGGACAAAGTACGACCA 1033326
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| | |||||||| | | |||| | || || |||||||| || ||||||||||||
Sbjct 1033327 TCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATGCCTTCTTTA 1033386
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| |||||| ||| | | ||| | || || | || || ||||| | || |
Sbjct 1033387 TCTTGAATTTTGGCTTTAACATTTTCGATGGTGTCCGATGGTTCGACTTCCAAAGTGATG 1033446
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACTTATTAGATT 132136
||||||||||||| ||||||| ||| || ||||||| | ||| ||||
Sbjct 1033447 GTTTTACCAGTCAATGTTTTTACGAAGATTTGCATGATTGATT-GATT 1033493
Score = 116 bits (128), Expect = 4e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
|||||||||| | | || ||||||||||| ||||| ||| | |||||| ||||||
Sbjct 1031846 ACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCGGATAAGGTACGGCCATCTTCC 1031905
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
| |||||||| | | || | ||| || |||||||| || || ||||| ||||| |
Sbjct 1031906 AATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCCTTATCTTGA 1031965
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || ||| | | ||| | ||||| | ||||| ||||| | || | |||||||
Sbjct 1031966 ATCTTGGCTTTTACATTTTCGATTGTATCCGATGGCTCGACTTCCAAAGTGATCGTTTTA 1032025
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| || || || | |||||| |||||
Sbjct 1032026 CCAGTTAGGGTCTTGACGAAAATTTGCAT 1032054
Score = 104 bits (114), Expect = 2e-17
Identities = 156/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||| || ||||| || | ||| | | || ||||||||||||||||| || || ||
Sbjct 1032517 ACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGACAATGT 1032576
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| |||||| |||||||| || | | || | ||| || || ||||| || || ||
Sbjct 1032577 TCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGAATTCC 1032636
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|||||| || ||||| || | | ||| | ||||| | || |||||||| |
Sbjct 1032637 TTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCACTTCCAA 1032696
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | ||||||||||||| |||||| | |||||||||||
Sbjct 1032697 TGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|| ||||||||||| | | || || |||||||||||||| ||| || || | |
Sbjct 1032068 CGTAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGGACAAAGTTCTTCCA 1032127
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| | || || |||| | |||| | || || |||||||| || || || |||||
Sbjct 1032128 TCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGGGAATTCCCTCTTTG 1032187
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||||| ||| | | ||| | ||||| | ||||| ||||| | || |
Sbjct 1032188 TCCTGGATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGACTTCCAATGTAATA 1032247
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|||||||| || |||||||| | |||||| |||||
Sbjct 1032248 GTTTTACCGGTAAGAGTTTTGACGAAAATTTGCAT 1032282
>seq391
Length=841353
Score = 125 bits (138), Expect = 7e-24
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| ||||| |||| ||| | |||| || |||||||||||||| || || || ||
Sbjct 250942 CAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGACAATGTCCG 251001
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
|||||| || || || || || | | | |||| ||||||||||| || || || |||||
Sbjct 251002 CGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGAATCCCTTC 251061
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
|||||| |||||| ||||| ||| | |||||| | ||||| ||||||| |
Sbjct 251062 TTTATCCTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTACTTCGAGAGA 251121
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| |||| || |||| |||||||| ||||| |||||
Sbjct 251122 AATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
>seq335
Length=939964
Score = 111 bits (122), Expect = 1e-19
Identities = 348/528 (66%), Gaps = 11/528 (2%)
Strand=Plus/Minus
Query 147466 GACGCCAGATTGCAGACGGCCGTCTCTTCG-GCGTCGCTGTACTGCACGATTTCGGCGCA 147524
||||| || ||||| || || |||| ||| ||| || |||||||||| | ||| | |||
Sbjct 179552 GACGCGAGGTTGCACACCGCGATCTCCTCGCGCGACG-TGTACTGCACCACTTCCGTGCA 179494
Query 147525 CAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTC 147584
|||||| | | | ||| || | || |||| || || || |||||||||||
Sbjct 179493 CAGGTTCGAGGACTGGATGGTGCCGAGGTTCCGCTGGTTCGACTTGCGGTTGCACGCGTC 179434
Query 147585 TTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGCAG 147644
||| | | || |||||| ||| ||||||| ||||| | || || | | | ||
Sbjct 179433 CTTGTACACCAAGTACGGATTGCCCGTCTCGATCTGCGTGTTCACAATGACCGTCCAGAG 179374
Query 147645 GTCCTGCGCTCGCACCCGCTGC-CGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACC 147703
| |||| |||| || || ||| |||| |||| ||||| ||| ||||| |
Sbjct 179373 CGCGCGCGCCTTCACCTGCCGCACGA-AGCGCTGCTCGGCCTCGTAGCGCGTGTACAGCG 179315
Query 147704 GCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCG 147763
|| ||||| |||| || ||| | ||| || |||| |||||||||||
Sbjct 179314 CGTCGAACTCCGCGCCCCAGACTTCGAACAAGCCCGGCGACTGCGCGGGACACATCAGAC 179255
Query 147764 ACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACA 147823
||||| | |||| ||| ||||| ||||| |||| || | ||||| | |
Sbjct 179254 TCCACACGCCGTCTTCGTCCACGCGGCGCATGAACAAGTCGTTGATGTACAGCCCCAGGA 179195
Query 147824 TAAGATCGCGCGCTTTGCAA-TCCTCGGCGCCCATGTTGCGTTTCAAAT-TAAGCACGCT 147881
|| || |||| | |||| || ||| ||| |||||| || | | | || |
Sbjct 179194 AGAGGTCCCGCG-TGCGCAACTCTTCGTTGCCGTGGTTGCGCCGCAGCTCGATGAACTCG 179136
Query 147882 ATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTT---TCC 147938
| ||||||| |||||||| || || | ||||| || | | ||||| ||||| ||
Sbjct 179135 A-AGATGTCTGCGTGCCACGGCTCCAGGTAGATCGCGAAGCCGCCTTTGCGCTTGCCGCC 179077
Query 147939 GCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGG 147986
|||||||||||| | |||| | | ||| |||||||||| ||| ||
Sbjct 179076 GCCCTGGTCGACGTAGCGCGCGGTCGCGTTGAACACGCGCAGCATCGG 179029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476603323999920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |