Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq335 268 1e-65
seq768 111 2e-18
>seq335
Length=939964
Score = 268 bits (296), Expect = 1e-65
Identities = 377/519 (73%), Gaps = 19/519 (4%)
Strand=Plus/Plus
Query 1455801 GAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTG 1455860
|| ||||||||||||||||||||||| | ||||| |||||| || | ||||||
Sbjct 899777 GAAGCCTCCTTTTGGACCGCCGAGGAAATTGACCTGTCTGCCGACTTGGACGACTGGGAC 899836
Query 1455861 TCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAG 1455920
|||||| |||| ||||| || |||||||||||||| ||||| ||||| ||| || ||
Sbjct 899837 GCGCTGAAGGACGGTGAGCGGCACTTCATCAAGCACGTGCTCGCGTTTTT-CGCGGCGAG 899895
Query 1455921 CGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGA 1455980
||| ||||||||| |||||| || ||| |||||||| || || | || |||| |
Sbjct 899896 CGACGGCATCGTGCTCGAGAATCTCGCCAGCCGCTTTTTGGTCGAAATGCAGCTGCCCGC 899955
Query 1455981 GGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTC 1456040
| || |||||||| ||||||| | || || |||||||||||||| || || |||
Sbjct 899956 TGTCCGCGAGTTTTACGCGTTCCAGGTTGCGATGGAAAACATCCACTCGGAGACGTACAG 900015
Query 1456041 GCTCCTGATCGACACCTACGTC---AAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGC 1456097
| ||||||||||||||| || || | | | ||| ||| | | | |||||
Sbjct 900016 CTTGCTGATCGACACCTACCTCGCGCAGCAGGCCGACGAAAAGCTGCGGTTGCTGCGCGC 900075
Query 1456098 CATCGA-CACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACA 1456156
||||| ||| |||||| |||| | ||||| || |||||| | ||||||||| |||
Sbjct 900076 AATCGAGCAC-GTGCCGGCGGTCAAACGCAAGGCGGAGTGGGCGGTCAAGTGGATC-ACA 900133
Query 1456157 AGGAGGGCCTCGACACT---TTGCCGAGCGGCTCGTCG-GCTTTGCCGCGTCGAGGGCAT 1456212
| ||||| ||| | || || || || ||| | ||||| ||||| |||||
Sbjct 900134 ------GGCTCGA-ACTCGCTCGCGGAACGCCTGCTCGCGTTTTGCGCGGTCGAAGGCAT 900186
Query 1456213 CTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272
||| ||| ||| || ||||| ||||| |||||||||||||||||||| |||||||
Sbjct 900187 CTTGTTCAGCGGCTCGTTTTGCGCGATCTTCTGGCTCAAGAAGCGCGGCCTGCTGCCCGG 900246
Query 1456273 TCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAG 1456311
| || | || ||||||||| | ||| ||||||||||
Sbjct 900247 GC-TCAGTTTCAGCAACGAACTGATCTCGCGCGACGAAG 900284
Score = 154 bits (170), Expect = 2e-31
Identities = 211/292 (72%), Gaps = 2/292 (1%)
Strand=Plus/Plus
Query 259895 ATGTCGCAGCA-GTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953
|||||| |||| ||| |||| | |||||||| ||||| || || ||||| | |||
Sbjct 178786 ATGTCG-AGCAAGTTTTTCATCCACGCGACGCCGACGCTGTTCAACGCCGGGCTGAAGCG 178844
Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013
| ||| || ||||||||| || | ||| | ||| |||||||||||||| |
Sbjct 178845 GCAACAGCTCTCCAGCTGCTTTCTGCTGCAGATGGCCGACGACTCGATCGAGGGCATTTT 178904
Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073
|||||||| ||| |||||||| | ||| |||| || ||||| ||||| | ||
Sbjct 178905 CGACACGCTGAAGGAGTGCGCGGTGATCAGCAAGTACGCTGGCGGGATCGGGCTCGCGAT 178964
Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133
|||||| | ||||| || ||| ||| | |||||||| ||||| | |||||| |
Sbjct 178965 CCACAAGATCCGCGCGACGAACGCGTACATCGCGGGCACGAACGGGCGCAGCAACGGGAT 179024
Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185
||||| ||||| ||||| || |||| || |||||||||||||||||| ||
Sbjct 179025 CGTGCCGATGCTGCGCGTGTTCAACGCGACCGCGCGCTACGTCGACCAGGGC 179076
Score = 96.9 bits (106), Expect = 5e-14
Identities = 358/544 (66%), Gaps = 34/544 (6%)
Strand=Plus/Plus
Query 262879 TGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAACTCGTTGCTC 262938
||||||||||| | ||||| | | || | || | || ||||||||| ||||
Sbjct 179977 TGGGACTGGGAGGAGCTGCGCGAGGCGATGGTCAAGTACGGGCTGCGCAACAGCCTGCTG 180036
Query 262939 GTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGAG 262998
|| |||| ||||| ||||| |||| ||||||||||| || ||| |||| ||||||||
Sbjct 180037 GTCGCGCCGATGCCGACGGCGTCGACTTCGCAGATCCTCGGGAACTGCGAGTCGTTCGAG 180096
Query 262999 GTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCAAC 263058
|||| ||| | | ||||||||||||||| ||||| || |||| |||||
Sbjct 180097 CCGTACACGTCGAACGTGTTTACGCGCCGCGTGCTCAGCGGCGAGTTCTGCGTGCTCAAC 180156
Query 263059 CGCCACCTGGT-CAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCG-ACTTTCGCGACC 263116
||| |||| | |||| | | || ||| |||||| || | || || | |
Sbjct 180157 AAGCACTTGGTGCTCGCGC-TCTCGAAGCTCGGGCTGTGGTCGGAGGCGCTGAAGC-AGC 180214
Query 263117 GGCTCATTGCGGCAC-AGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGC--CCG 263173
|||||| || |||| | |||||||||||| ||| |||||| | |||| |||
Sbjct 180215 AGCTCATCGC-GCACAACGGCTCGGTGCAG----CTGA--TCGAGGAAATCCCGCAGCCG 180267
Query 263174 ATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGAC--CATTGATAT 263231
|| ||||| || |||||||| |||||| | | | | | | | ||| || ||
Sbjct 180268 --CTGAAGGCGCTGTTCAAGACGACCTGGGAGAT--CAAGCAGCGCAGCTACATCGACAT 180323
Query 263232 GGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGA 263291
| ||| || |||||||| | || |||| ||||||||| || | ||||||
Sbjct 180324 GTCGGTCGCGCGCGCGCCGTTCATCTGCCAGTCGCAGTCGCTCTCGCT---CTTCGCCG- 180379
Query 263292 CCCGACGGCCGA------GAGC-ATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCC 263344
|| ||||||| | || | ||| |||||| || |||||| | || |
Sbjct 180380 --CG-CGGCCGAGCTTTGGTGCGCTGACGAGCATGCACTTTTACGCGTGGAAACAAGGGC 180436
Query 263345 TCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCG 263404
|||| || || | ||||| ||||||| || | ||| | |||| || | ||||| |
Sbjct 180437 TCAAAACGGGACTCTACTACCTGCGCATCCAGAGCGCGACGGACGCGATCAAGTTCACGG 180496
Query 263405 TCGA 263408
| ||
Sbjct 180497 TGGA 180500
>seq768
Length=1243675
Score = 111 bits (122), Expect = 2e-18
Identities = 143/195 (73%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 1818081 GTCACGCGCTCGGGAAAGGTGAGCGTCTTGACGAT-CTCATAGGGCACGCCCACCTCGTC 1818139
||||| ||||||| || || || | | |||| || || ||||||||| || |||||
Sbjct 884238 GTCACTAGCTCGGGGAACGTCAGGCACATCGCGATGCTGAT-GGGCACGCCGACTTCGTC 884180
Query 1818140 AATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTAAAGTTGACGCGCTTGCC 1818199
| || || | |||||| | ||||||||| ||||||| | |||| |||||||||||
Sbjct 884179 CAGCTCGATGTTAGGGTCGCCGGTGATGACGGTGCGCGCGCTGAAGTCCACGCGCTTGCC 884120
Query 1818200 CATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCGCTCCACGAGGCCCTTGGT 1818259
||| |||||||| | || |||||||||||| || || || ||| | || || |
Sbjct 884119 CATCAGGTTGCCGCGCAGCCGGCCCTCCTTGCCTTTCAAGCGTTCCCGAATGCTTTTCAT 884060
Query 1818260 GGGCTTGCCCGACCG 1818274
||||||| ||||||
Sbjct 884059 CGGCTTGCGCGACCG 884045
Score = 109 bits (120), Expect = 8e-18
Identities = 196/280 (70%), Gaps = 15/280 (5%)
Strand=Plus/Minus
Query 1817496 GCCGATGATGGGCTTGTTGGCCTGCGGCGACACGGTCTTGAGGGCCACGTT-CATGGTGT 1817554
||| || | |||||||||| ||||||||| ||| ||| || || |||| || | ||
Sbjct 884665 GCCCATCACGGGCTTGTTGCTCTGCGGCGAGACGATCTGGAAGGGCACGGCGCACAG-GT 884607
Query 1817555 GCGTCACCTCGGCGCGCGCGTC-TCAGACTGGGGCACATGGAGGTTCATCTCGTCGCCGT 1817613
|| | ||||||||||| || | | ||| | || || |||||||||||||||||||
Sbjct 884606 GCCGGATTTCGGCGCGCGCCTCGTGCGTCTGCGCCAGGTGCAGGTTCATCTCGTCGCCGT 884547
Query 1817614 CAAAGTCGGCATTGTAGGTGCCCGTGACGGCCAGGTTGAACCGCATGGTACGGCCGGGCA 1817673
| |||||||| ||||| | |||||| ||||| | || | ||| | |||||
Sbjct 884546 CGAAGTCGGCGTTGTACGGCGAGGTGACGCTGAGGTTCACGCGGAAGGTCGAGTAGGGCA 884487
Query 1817674 TGGGCAC---CACCTTGTGCATGAGCATGGAGCCCA---TGTGGAGTGAGGGCTGCCGGT 1817727
| ||| ||| ||| | |||| || || |||| || |||||||||||||
Sbjct 884486 T---CACGCGCACGCGGTG---GCCCATGATGCTCATCTTGTGCAGCGAGGGCTGCCGGT 884433
Query 1817728 TCATCACCACGGCGTCGCCGGCGCGCAGGTGACGCTCGAC 1817767
| | | |||| |||||||| | ||| ||| ||||||||
Sbjct 884432 TGAAGAGCACGAAGTCGCCGGTGAGCAAGTGCCGCTCGAC 884393
Score = 104 bits (114), Expect = 3e-16
Identities = 121/161 (75%), Gaps = 2/161 (1%)
Strand=Plus/Minus
Query 1816126 CTCCATCGACTTGATGCACCGGCGCTGGATGTAGCCACGTC-CGGCGGTCTTGACGGCCG 1816184
||| | || ||| | | ||| |||||||||||||| ||| ||| ||| ||| || |
Sbjct 885718 CTCGAGCGCCTTCACGAGCCGACGCTGGATGTAGCCG-GTCTCGGAGGTTTTGCACGCAG 885660
Query 1816185 TGTCGACCAGGCCCTCGCGGCCGCCGATCATGTGCAAAAACATCTCGCGCGAGTTGAGGC 1816244
|||||| | ||| ||||||||||| ||| ||| || |||| ||| ||| | ||||
Sbjct 885659 TGTCGATGATGCCTTCGCGGCCGCCCATCGCGTGGAAGAACAGCTCCTGCGGCGTCAGGC 885600
Query 1816245 CGCGCTCGTACGAGTTGCGCACAAAGCCGCGGCTCTCGGGC 1816285
| || |||||||||||| || ||||||||||| ||||||
Sbjct 885599 CCTGCAGGTACGAGTTGCGGACGAAGCCGCGGCTGTCGGGC 885559
Score = 87.8 bits (96), Expect = 3e-11
Identities = 150/213 (70%), Gaps = 10/213 (5%)
Strand=Plus/Minus
Query 1601276 ACCAGCGGCACCTGCGGGTAGCACAGGGCGTGCGACACCGTGTCGATG-GCATGGTCGGC 1601334
|| |||||| ||||| |||| |||| |||||| || ||||| | | ||| ||
Sbjct 333770 ACGAGCGGCTTCTGCGTGTAGAACAGCACGTGCGCGGACGAGTCGAAGCGGATGC-CGAA 333712
Query 1601335 GTTGAGCGACACG---ACGGCCTTGCTCTGCTTGCCCATGGCCGTCTGGTAGATGTTGCG 1601391
||| ||||| | ||| | | |||||||||||| || ||||||||| ||||||
Sbjct 333711 GTT---CGACATGTACACGCCAATCGCCTGCTTGCCCATCGCGCTCTGGTAGACGTTGCG 333655
Query 1601392 CGGCGCCTGGTTGTGGTTGGAAAACGGGATGATGGACGCGCAGGCGCCCAGCATGAGCAG 1601451
||||| ||||||||||| || ||||| || | | ||||||| | || | || ||
Sbjct 333654 CGGCGACTGGTTGTGGTCGGGGAACGGAATCAAGCTCGCGCAGACACCGAAGATCAGGCT 333595
Query 1601452 CGGGTGGACCTCGACGTGCGTAAAGGGCTCGCG 1601484
|||||| | |||| ||||| | |||||||
Sbjct 333594 CGGGTGAATCTCGCAATGCGTGTA--GCTCGCG 333564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177683690670164
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