Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq768 131 2e-25
seq1 131 2e-25
seq558 122 8e-23
seq391 100 3e-16
>seq768
Length=1243675
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | || || |||||| || | ||| ||||||||| |||||||| || ||
Sbjct 1130696 CCGCCACGCAGCCGCAGCACCAAGTGGATCGTCGACTCCTTTTGGATGTTGTAGTCCGCG 1130755
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || ||| |||| |||| |||||| || ||||| |||| ||||||||||||| |||
Sbjct 1130756 AGCGTGCGCCCGTCATCCAACTGCTTCCCGGCAAAAATCAGACGCTGCTGGTCCGGCGGA 1130815
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || |||||||||| |||||| || | | | | ||||||| | | ||||||
Sbjct 1130816 ATGCCCTCCTTGTCCTGGATCTTAGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCACC 1130875
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| | || ||||| | || ||||| || || |||||
Sbjct 1130876 TCAAGGGTGATGTTCTTCCCCGTGAGCGTCTTCACGAAGATTTGCAT 1130922
>seq1
Length=3593316
Score = 131 bits (144), Expect = 2e-25
Identities = 174/238 (73%), Gaps = 3/238 (1%)
Strand=Plus/Plus
Query 35503 TTTA-TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGT 35561
|||| ||||||||||| | | ||| ||||||||||| || || ||||| ||||| |
Sbjct 1031592 TTTAGTTTCCACCACGAAGTCGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTAT 1031651
Query 35562 AATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGT 35621
|||||| ||| ||||| | || |||| || || || ||||| ||||| |||||||| |
Sbjct 1031652 AATCGGACAATGTTCGACCATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGAT 1031711
Query 35622 CCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTC 35680
| | |||| | || ||||| ||| |||||| || | | || | | || ||
Sbjct 1031712 CTGGTGGAATACCTTCTTTGTCTTGGAT-TTTTGCTTTGACATTTTCGATAGTATCCGAT 1031770
Query 35681 GATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
| |||||| |||| ||||| |||||||| ||||| ||||| || || || |||||||
Sbjct 1031771 GGTTCCACTTCCAAGGTGATGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCATTC 1031828
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||||||||| | ||| || | ||| | || || ||||||||||||||||| | |
Sbjct 1032512 CCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGAC 1032571
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| ||||| | || || ||||| || || || || ||||| || |||||||| | |||
Sbjct 1032572 AATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGA 1032631
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | || ||||| ||| || ||| | | || | | || || | ||||||
Sbjct 1032632 ATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCACT 1032691
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| || || |||||||| ||||||||||| ||||| ||||||||
Sbjct 1032692 TCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||||| | ||| |||||||| || || ||| ||||| ||||||||||| |
Sbjct 1032284 CCACCACGTAGACGCAATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCCGAT 1032343
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || || | || ||||| ||||| ||||| || |||||||| | |||
Sbjct 1032344 AATGTACGACCATCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGTGGA 1032403
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| | ||| || ||| ||| ||||| ||||| | || | | || || | ||| ||
Sbjct 1032404 ATTCCCTCTTTATCC-TGAATTTTTGCCTTCACATTTTCGATTGTATCAGATGGTTCAAC 1032462
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| |||||||| ||||| |||||||| || || |||||
Sbjct 1032463 GTCTAATGTGATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCAT 1032510
Score = 120 bits (132), Expect = 3e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
||||||||||||| | ||| ||||||||||| || || ||||| || || ||||| |
Sbjct 1033025 TTCCACCACGTAAACGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCG 1033084
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
||| ||||| | || || || || ||||| ||||| ||||| || ||||| || | |
Sbjct 1033085 ACAATGTTCGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTG 1033144
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686
||| | || || ||| ||| ||| || |||| | || | | ||||| | |||
Sbjct 1033145 GAATACCTTCTTTATCCTGGAT-TTTAGCTTTCACATTTTCGATAGTGTCCGATGGTTCG 1033203
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| |||| || || ||||| || ||||||||||| || || || |||||
Sbjct 1033204 ACTTCCAAAGTAATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || |||||||| || || |||||||||||||||||||||| |
Sbjct 1032056 CCACCACGGAGACGTAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGGAC 1032115
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| |||| | || |||| ||||| || ||||| ||||| || ||||| || | |||
Sbjct 1032116 AAAGTTCTTCCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGGGA 1032175
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| | ||| |||||| ||| ||| || || | | || | | ||| || | || ||
Sbjct 1032176 ATTCCCTCTTTGTCCTGGAT-TTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGAC 1032234
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| || || |||||||| || | |||||| || || || |||||
Sbjct 1032235 TTCCAATGTAATAGTTTTACCGGTAAGAGTTTTGACGAAAATTTGCAT 1032282
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||||| | ||| |||||||| || || ||||||||||| || ||||||| |
Sbjct 1033255 CCGCCACGTAGACGCAATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCGGAC 1033314
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || |||| || ||||| ||||| ||||| || ||||| || | |||
Sbjct 1033315 AAAGTACGACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGA 1033374
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| || || ||| | ||| ||| || || | | || | | ||||| | ||| ||
Sbjct 1033375 ATGC-CTTCTTTATCTTGAATTTTGGCTTTAACATTTTCGATGGTGTCCGATGGTTCGAC 1033433
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| ||||| |||||||| ||||| ||||| || || || |||||
Sbjct 1033434 TTCCAAAGTGATGGTTTTACCAGTCAATGTTTTTACGAAGATTTGCAT 1033481
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/232 (69%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||| | | | |||||||||||| || || |||||||| ||||||||||
Sbjct 1031826 TTCCACCACGGAGACGAAGCACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCGG 1031885
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
||||| || | || |||| || ||||| || || ||||| || ||||| || | |
Sbjct 1031886 ATAAGGTACGGCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGTG 1031945
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGAT---T 35684
||| | ||||| || ||||| || | | || | | || || |||| |
Sbjct 1031946 GAATACCTTCCTTATCTTGAATCTTGGCTTTTACATTTTCGATTGTATC---CGATGGCT 1032002
Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || |||| |||||||||||||| || | || || || || || |||||
Sbjct 1032003 CGACTTCCAAAGTGATCGTTTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1032054
>seq558
Length=611125
Score = 122 bits (134), Expect = 8e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || ||||||||||| || || | || || ||||||| |||||||| ||||||||
Sbjct 303905 CTCTTTCTGAATGTTGTAGTCCGCGAGCGTGCGTCCGTCGTCGAGCTGCTTCCCCGCAAA 303846
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| ||||||||||||| |||| || ||| |||||| |||||| || | |
Sbjct 303845 GATCAAGCGCTGCTGGTCCGGCGGAATGCCCTCTTTGTCCTGGATCTTAGCTTTGACGCT 303786
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||||| | | ||||| || | ||| || | || ||||| | || || ||
Sbjct 303785 CTCGATCGTGTCGTTTGGGTCCACTTCGAGCGTTATGTTCTTGCCCGTGAGTGTCTTGAC 303726
Query 35725 AAATATCTGCAT 35736
||||||||||||
Sbjct 303725 AAATATCTGCAT 303714
>seq391
Length=841353
Score = 100 bits (110), Expect = 3e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGC 35578
|||| |||||||| ||| || || |||||||||||||||||||| | ||| || |||
Sbjct 250943 AACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGACAATGTCCGC 251002
Query 35579 TCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC 35638
||||| || ||||| || ||||| || |||||||| || || | |||| | ||
Sbjct 251003 GAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGAATCCCTTCT 251062
Query 35639 TTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGT 35697
|| ||| ||| ||| | |||| || | | || ||| | | || || || | |
Sbjct 251063 TTATCC-TGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTACTTCGAGAGA 251121
Query 35698 GATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| |||| || ||||||||||| ||||| || |||||
Sbjct 251122 AATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450786150635760
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