Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq1212 181 2e-40 >seq1212 Length=1133891 Score = 181 bits (200), Expect = 2e-40 Identities = 375/557 (67%), Gaps = 17/557 (3%) Strand=Plus/Plus Query 161166 AACCTGATGAGATCTACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTTTCGAGGAAC 161225 |||| ||||| || || || ||| ||||| |||||||| |||||||| ||||| | Sbjct 1007730 AACCAGATGAAATATATAATTTAGCTGCACAAAGTCATGTAAAAGTATCATTCGATTTAA 1007789 Query 161226 CTGAATATACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGGCAGTTCGTC 161285 |||||| || || | |||||| || ||||| || || ||||||| ||| ||||| Sbjct 1007790 GTGAATACACTGCCAATGTTGATGCACTTGGAACATTACGATTATTGGATGCAATTCGTA 1007849 Query 161286 TCCTAGGTATGACAGATA-----GGGTCCGTA----------TCTACCAGGCATCCACCA 161330 | ||| ||| || || || |||| || ||| || Sbjct 1007850 CAGCAAATATAACAAATGAAAATGGAAAATTAAAAATGAAATTCTATCAAGCAAGTACTT 1007909 Query 161331 GTGAGTTGTATGGGTTGGTACAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCAC 161390 || |||||||| |||||||| ||| || ||||||||||| || || |||| Sbjct 1007910 CAGAATTGTATGGTAAAGTACAAGAAGTACCGCAACGTGAAACAACACCATTTTATCCAC 1007969 Query 161391 GATCTCCATATGGCGTAGCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGA 161450 |||||||||| || || || ||| | || ||||||||||| || || | || Sbjct 1007970 GATCTCCATACGGTGTTGCAAAATCATTTGCCTATTGGATTGTTGTCAATTATCGTGAAG 1008029 Query 161451 GTTATGGGATGCACGCCAGTAGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTG 161510 ||||| ||| ||| | ||||||||||||||| ||||| ||||| |||| |||| Sbjct 1008030 CTTATGAAATGTTTGCCGTCAATGGTATTCTATTCAATCATGAATCACCTAGACGTGGTG 1008089 Query 161511 AGACTTTCGTAACCCGTAAGATTACTAGGGGACTATCCCGTATTAGTACAGGA-CTACAG 161569 | || || || || ||||||||||| | || | | ||| || | | | ||| Sbjct 1008090 AAACATTTGTCACACGTAAGATTACACGTGGTGTGGCAAAAATT-GTTCTTAATCGACAA 1008148 Query 161570 GATTGTCTATACCTAGGTAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTAT 161629 || | | | | |||||| | | |||| |||||||||||| ||||| || ||| Sbjct 1008149 GAATTCATCGAATTGGGTAATTTGGATTCAAAACGAGATTGGGGCCATGCACGTGATTAT 1008208 Query 161630 GTGGAGGCTATGTGGTTGATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACA 161689 || || || |||||||| ||||||||||| |||| ||| || || | ||| ||||| || Sbjct 1008209 GTTGAAGCCATGTGGTTAATGTTACAACAAGAAAATCCGGAAGATTTTGTCATTGCAACC 1008268 Query 161690 GGTAAAGAGTATTCAGT 161706 ||| ||| ||||||| Sbjct 1008269 GGTGAAGCACATTCAGT 1008285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729917537913360