Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq335 118 3e-21
>seq335
Length=939964
Score = 118 bits (130), Expect = 3e-21
Identities = 496/770 (64%), Gaps = 30/770 (4%)
Strand=Plus/Plus
Query 254759 CATGCGACCCCGACTCTCTTCACGGCCGGTCTGAAGCGCCAAACCTTGGCCAGCTGCTAC 254818
|| ||||| ||||| || |||| ||||| |||||||| ||| | |||||||||
Sbjct 178807 CACGCGACGCCGACGCTGTTCAACGCCGGGCTGAAGCGGCAACAGCTCTCCAGCTGCTTT 178866
Query 254819 CTACTGACCATCAGTGAAGACAGTATCCAAGGCATCTTCGAAACGCTATCGCGATGCGCA 254878
|| ||| || || ||| ||| | ||||| ||||| ||||| | |||||
Sbjct 178867 CTGCTGCAGATGGCCGACGACTCGATCGAGGGCATTTTCGACACGCTGAAGGAGTGCGCG 178926
Query 254879 TTCGTGAGTCAATCGAGC-GGCGGCGTGGGACTCAACATCTCCAACGTGCGCGCCAGCGG 254937
| | || ||| || ||||| | || ||| ||| ||| | ||||| | |
Sbjct 178927 GTGATCAG-CAAGTACGCTGGCGGGATCGGGCTCGCGATCCACAAGATCCGCGCGAC--G 178983
Query 254938 CACACCGAT-TCGCTCG-ACGAACGGACGGAGCGGCGGCATTATACCAATGATCCGTGTG 254995
|| | | |||| | |||||||| || ||| ||| || | || ||| | || |||
Sbjct 178984 AACGCGTACATCGCGGGCACGAACGGGCGCAGCAACGGGATCGTGCCGATGCTGCGCGTG 179043
Query 254996 TTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGCCCAGGAGCGTTCACC 255055
|||||| || ||||||||||| || || |||||||| ||| ||| | ||| |
Sbjct 179044 TTCAACGCGACCGCGCGCTACGTCGACCAGGGCGGCGGCAAGCGCAAAGGCGGCTTCGCG 179103
Query 255056 ATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTGCTGTCCGACAAGACC 255115
||||||||||||||||||||||| ||||| ||| | |||| ||| |
Sbjct 179104 ATCTACCTGGAGCCGTGGCACGCAGACATCTTCGAGTTCATCGAGCTGCGGCGCAACCAC 179163
Query 255116 GGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGGTGCTG--------CG 255167
|||| ||| ||| || ||| |||| ||| || |||| |||| ||
Sbjct 179164 GGCAACGAAGAGTTG--CGCACGCG------GGACCTCTTCCTGGGGCTGTACATCAACG 179215
Query 255168 ATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGTCCCAACTTAT 255227
| |||| ||||| |||||||| ||||| ||||| || ||||||||| |
Sbjct 179216 ACTTGTTCATGCGCCGCGTGGACGAAGACGGCGTGTGGAGTCTGATGTGTCCCGCGCAGT 179275
Query 255228 CGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTGGAGTACGAG- 255286
|||| || | |||| ||||| | ||||| || ||||| | ||||||
Sbjct 179276 CGCCGGGCTTGTTCGAAGTCTGGGGCGCGGAGTTCGACGCGCTGTACACGCGCTACGAGG 179335
Query 255287 -CGTGCCGGCCGGTTCGTACGCCAAGTGCCCGCGAAGAAGATCTGGAACACGATGGTGCG 255345
|| || | || ||||| || || ||| ||| | |||||| || |||
Sbjct 179336 CCGAGCAG--CGCTTCGTGCGGCAGGTGAAGGCGCGCGCGCTCTGGACGGTCATTGTGAA 179393
Query 255346 CATGCAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAGAC-CACATAAACGCACGGT 255404
|| |||| | || || || | |||| | | || |||| ||| | || |||| ||
Sbjct 179394 CACGCAGATCGAGACGGGCAATCCGTACTTGGTGTACAAGGACGCGTGCAACCGCA-AGT 179452
Query 255405 CGAACCAACGCCACCGCGGTACGATACGCGGCTCGAACCTGTGCACCGAGATTACGTTGC 255464
||||||| || ||| ||| || || | ||||||||||||||| || | | |
Sbjct 179453 CGAACCAGCGGAACCTCGGCACCATCCAGTCCTCGAACCTGTGCACGGAAGTGGTGCAGT 179512
Query 255465 ACACGTCAGCGC-AAGAGGTGGCCGTTTGCAACTTGGCGTCCATCTCGCT 255513
||||||| |||| | ||| | || || |||||| | ||||| | |||||
Sbjct 179513 ACACGTC-GCGCGAGGAGATCGCGGTGTGCAACCTCGCGTCGCTGTCGCT 179561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588309096566290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |