Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq335 131 2e-25
>seq335
Length=939964
Score = 131 bits (144), Expect = 2e-25
Identities = 551/854 (65%), Gaps = 21/854 (2%)
Strand=Plus/Minus
Query 118716 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCAC 118775
||||| || || ||||| | | |||| || ||||||| | | ||||||||||
Sbjct 179552 GACGCGAGGTTGCACACCGCGATCTCCTCGCGCGACGTGTACTGCACCACTTCCGTGCAC 179493
Query 118776 AAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 118835
| ||| || || |||||||| | |||| || || ||||| ||| ||||| |||
Sbjct 179492 AGGTTCGAGGACTGGATGGTGCCGAGGTTCCGCTGGTTCGACTTGCGGTTGCACGCGTCC 179433
Query 118836 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACA 118895
||||| | || ||| || | |||||||| | || | || | ||| || ||||||
Sbjct 179432 TTGTACACCAAGTACGGATTGCCCGTCTCGATCTGCGTGTTCACAATGACCGTCCAGAGC 179373
Query 118896 TCGGCAGCTGGCACAGTGGCGTTGGCT-CGCCCCTCTTCCTCGTACTTTGTGTAGAGGGC 118954
|| || ||| || || | ||| ||| ||||||| ||||| || ||
Sbjct 179372 GCGCGCGCCTTCACC-TGCCGCACGAAGCGCTGCTCGGCCTCGTAGCGCGTGTACAGCGC 179314
Query 118955 TTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGA 119014
|| ||||| | ||| | | || | | || || | || | || || | |||
Sbjct 179313 GTCGAACTCCGCGCCCCAGACTTCGAACAAGCCCGGCGACTGCGCGGGACACATCAGACT 179254
Query 119015 CCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAA 119074
||| || | || || || || |||||| | ||| ||| | ||| || |||
Sbjct 179253 CCACACGCCGTCTTCGTCCACGCGGCGCATGAACAAGTCGTTGATGTACAGCCCCAGGAA 179194
Query 119075 GAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCAT 119134
||| ||||| ||| ||||| | || || ||| | |||| ||| | || || |
Sbjct 179193 GAGGTCCCGCGTGCGCAACTCTTCGTTGCCGTGGTTGCGCCGCAGCTCGATGAACTCGAA 179134
Query 119135 GATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGC 119191
||| || ||||||||||| |||||||| | ||||| || || || | || |
Sbjct 179133 GATGTCTGCGTGCCACGGCTCCAGGTAGATCGCGAAGCCGCCTTTGCGCTTGCCGCCGCC 179074
Query 119192 CTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGA 119251
||||| || || | ||| || ||||| || || || ||||| || | ||| || | |
Sbjct 179073 CTGGTCGACGTAGCGCGCGGTCGCGTTGAACACGCGCAGCATCGGCACGATCCCGTTGCT 179014
Query 119252 TTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATA 119309
| || || || ||| ||| |||| | || | || | || | |||||| |
Sbjct 179013 GCGCCCGTTCGTGCCCGCGATGTACGCG--TTCGTCGCGCGGATCTTGTGGATCGCGAGC 178956
Query 119310 CCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCA 119369
|| || || || || |||| ||| |||||||||| | || || || | || ||
Sbjct 178955 CCGATCCCGCCAGCGTACTTGCTGATCACCGCGCACTCCTTCAGCGTGTCGAAAATGCCC 178896
Query 119370 TCGATCGAGTC-ACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGT 119428
||||||||||| | || ||| | || |||||||| || | || ||| | |
Sbjct 178895 TCGATCGAGTCGTCGGCCATCTGC-AGCAGAAAGCAGCTGGAGAGCTGTTGCC--GCTTC 178839
Query 119429 A--CCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGT 119484
| || |||||||| || || || ||||||||||||| | | |||| ||||||
Sbjct 178838 AGCCCGGCGTTGAACAGCGTCGGCGTCGCGTGGATGA--AAAACTTGCTCGACATCAGCC 178781
Query 119485 CGTAGGTCTCCAAGA-CGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATA 119543
||| |||||||| | | |||| || ||| || ||| || ||| ||| || |||||
Sbjct 178780 GGTACGTCTCCAAAATCCGCGGCAA-GTCGCCCAAGTGGATCGCGACCGACACGCGCATG 178722
Query 119544 AACATGTATTGGGG 119557
|||||||| || ||
Sbjct 178721 AACATGTACTGCGG 178708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618424980358320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |