Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq569 167 3e-36
seq1 125 8e-24
seq1212 114 2e-20
seq768 100 3e-16
>seq569
Length=351751
Score = 167 bits (184), Expect = 3e-36
Identities = 458/695 (66%), Gaps = 10/695 (1%)
Strand=Plus/Plus
Query 104909 CAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAAT 104968
|||| || || ||||| ||||| ||| | |||||||| ||||| | || |||
Sbjct 123858 CAAATTGAAACCGGTACTCCATATATGTTATACAAAGATCATTGTAATCGTAAATCAAAT 123917
Query 104969 CAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACA 105028
||| | ||| | ||| || || |||| ||||| ||||||||||| | |||| | ||
Sbjct 123918 CAACAAAATCTTGGTACAATTAAATGTTCAAATCTTTGTACAGAAATTGTTGAATATTCA 123977
Query 105029 GACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT 105088
|||||| ||| || ||||| | ||||| || | | || | ||| |||
Sbjct 123978 TCACCAGATGAAGTGGCCGTATGTAATTTAGCATCGATTTCATTACCACGTTTTGTTGAT 124037
Query 105089 CCAGAGACAAAGACA-TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAA 105147
| | | || | || ||||||||||||||||| | || || ||| | || ||
Sbjct 124038 CAAAA-ACTCGGTCAATTTGATTATGAAAAACTTAAAAAAATTGTTAAAGTAATGACAAA 124096
Query 105148 AAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATC 105204
||| |||||| | |||||||| | |||| ||| || | ||||| | | ||
Sbjct 124097 AAATTTAAACAAAATTATTGATGGTAATTATTATCCATTACCGGAGACAAGACTT---TC 124153
Query 105205 TAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCT 105264
||| | | || || || ||||| || ||||| || ||| | || |||| ||||| |||
Sbjct 124154 AAATTTACGTCATCGACCTATTGGACTTGGTGTACAAGGTTTAGCCGATGCATTCAGTCT 124213
Query 105265 TTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGAC 105324
| || | ||| ||| ||||| || |||| ||| | |||||||| ||
Sbjct 124214 ATTACGTTATCCATATGAAAGTTTGGAAGCAAAAAAAATGAATATCCAAATATTTGAAAC 124273
Query 105325 CATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGA 105384
|| ||| | | || | || || |||| || || ||||| |||||||||||||
Sbjct 124274 AATTTATTATGGTGCATTGGAAGCAAGTTGTGAATTAGCAGAACAATATGGTCCATATGA 124333
Query 105385 AACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA 105444
||| | | | || || |||| ||| |||| | || |||| |||||||||| | || |
Sbjct 124334 AACTTATCAAGGATCACCAGTATCAAAAGGTATTCTACAATATGATATGTGGAATCGT-A 124392
Query 105445 GACCAAGC-TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTC 105503
||||| | || | | ||| | | || ||| || | | ||| |||
Sbjct 124393 CACCAACCGATCTTTGGAATTGGTCTGAATTGAAAGAAAAAATTTCCAAATATGGTATTC 124452
Query 105504 GTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATA 105563
| || ||| | | | || |||||||||||||| || ||||||||||| | |||||||
Sbjct 124453 GAAATAGTTTATTGGTTGCACCAATGCCAACAGCATCAACCGCACAAATTCTTGGTAATA 124512
Query 105564 ATGAATGCTTTGAACCCTACACGACGAACATCTAT 105598
|||||| |||||||| || || | || ||||||
Sbjct 124513 ATGAATCATTTGAACCATATACATCAAATATCTAT 124547
>seq1
Length=3593316
Score = 125 bits (138), Expect = 8e-24
Identities = 457/708 (65%), Gaps = 8/708 (1%)
Strand=Plus/Plus
Query 104894 GCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGT 104953
|||||||| | || |||| ||| ||||| |||||||||||| |||||||||| |||
Sbjct 3537122 GCTATTCTTGAATCACAAATCGAAACTGGAACACCATACATGGTTTACAAAGATCATTGT 3537181
Query 104954 AACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAA 105013
|| | ||| |||||| | ||| | ||| ||||| |||| ||||| ||||| |||
Sbjct 3537182 AATCGAAAATCAAATCAACAAAATCTCGGTACAATCAAATGTTCGAATCTTTGTACCGAA 3537241
Query 105014 ATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTC 105073
|| |||||| | || |||||||| || || ||||| || || |||||||| |
Sbjct 3537242 ATTGTGGAATATTCATCTAAAGATGAAGTAGCCGTCTGTAATCTAGCTTCAATCGCATTG 3537301
Query 105074 CCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACG 105133
|| | ||| |||||| | | | | ||||||| ||||||| | | ||
Sbjct 3537302 AATAAATTTGTTGATCCAAAAAAACGAATCTTTGATTTTGAAAAATTGAAATCCATTGTC 3537361
Query 105134 AAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT-TGAGAC 105192
|| ||| || || || ||| |||||| || | || || || || |||
Sbjct 3537362 AAGGTTGTAACTCGTAATCTGGACAAAGTTATCGACGTGACTTACTATCCTGTACCAGA- 3537420
Query 105193 TGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGA 105252
|||| || ||| | | || || ||||| || |||||||||| || | || ||
Sbjct 3537421 AGCTCAACGTTCGAATCTTCGTCATCGACCAATGGGAATCGGTGTTCAAGGATTAGCAGA 3537480
Query 105253 TGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAG--CGAAGGAAATCAATGCG 105310
|| || ||| | || | |||| ||| || |||| ||| | |||||
Sbjct 3537481 TGCGTTTATTTTGATGCGTTATCCATTCGATAGTGAAGAAGCTCGATTG--CTCAATATT 3537538
Query 105311 CGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTT 105370
| || ||||| || || ||| | | | | || |||||| || || || | |
Sbjct 3537539 CAGATTTTTGAAACAATTTATTATGGATCATTAGAAACGAGTTGTGAATTAGCCCAAGAA 3537598
Query 105371 GATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGAT 105430
| |||| ||||||||| | ||| || || |||| || |||| | || || ||||||
Sbjct 3537599 AAAGGTCAATATGAAACTTATGAAGGATCACCAGTATCTAAAGGCATTCTACAGTTTGAT 3537658
Query 105431 ATGTGGGAAGGTGAGACCAA-GCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAA 105489
|||| |||| | ||||| || | || ||| | | | | || || |||
Sbjct 3537659 ATGT-GGAATCGAAAACCAACAGATCTTTGGGATTGGAATGATTTGAAATCTCGAATCGC 3537717
Query 105490 GGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACA 105549
| | || | || || ||| | || ||||||||||||||||||| || || |||||
Sbjct 3537718 TAAATATGGAATACGAAATAGTTTGCTTGTGGCTCCAATGCCAACAGCTTCGACTGCACA 3537777
Query 105550 AATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 105597
||| | || || ||||| | | ||||| || || || || || ||
Sbjct 3537778 AATTCTTGGCAACAATGAGTCTATCGAACCTTATACAACTAATATATA 3537825
>seq1212
Length=1133891
Score = 114 bits (126), Expect = 2e-20
Identities = 270/405 (67%), Gaps = 2/405 (0%)
Strand=Plus/Plus
Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583
|||||||| ||||| || | || | || | |||||||||||| || ||||| || |||
Sbjct 869870 CGATCAAAACGACCAGGCCTTAGCAATGCTTTATCAAGGATATCTACACGATTAGTAGCG 869929
Query 9584 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9643
|| | ||||||| || | ||| ||||||||||| || || | ||| ||
Sbjct 869930 GCTAACACAACAACGTTTGAAGCCGTATTGAAACCATCCATTTCGACTAATAATTGATTT 869989
Query 9644 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACG 9703
| || | |||| ||||| || | |||| || ||| |||| ||| ||
Sbjct 869990 AATGTGTTTTCCTGTTCACTATGACCACCTATACTACGGCCACCACGTTTACGTCCAACA 870049
Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 9763
||||| || |||||||| || | |||||||| ||||| || || | | |||| | |
Sbjct 870050 GCATCGATTTCATCAATAAATAAAATGCATGGAGCATTTTTACGTGCCATTGCAAACATA 870109
Query 9764 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 9822
|| || ||||| | || |||||||||||||| || | ||| | | | || |||
Sbjct 870110 TCTCGAACACGTGAAGGACCAACACCAACAAACATTTCTAGAAACTCGGAACCAGATACA 870169
Query 9823 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9882
| |||||| || || |||| |||||| || | ||| ||| | | ||| || || ||
Sbjct 870170 GT-GATGAAAGGCACTTTAGCTTCACCGGCTGTTGCTTTGGCCAACAAAGTTTTGCCAGT 870228
Query 9883 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
||| || || | || || || ||| |||||| || || ||
Sbjct 870229 ACCAGGTGGTCCAGTTAGAAGTGCGCCTTTTGGAATTTTAGCACC 870273
Score = 98.7 bits (108), Expect = 1e-15
Identities = 253/382 (66%), Gaps = 4/382 (1%)
Strand=Plus/Plus
Query 7250 ACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAACGAGGAGACACCCTTCTAC 7309
||||| || ||| ||||||||| | |||| || ||| || ||||| || ||
Sbjct 1007906 ACTTCAGAATTGTATGGTAAAGTACAAGAAGTACCGCAACGTGAAACAACACCATTTTAT 1007965
Query 7310 CCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTCGTCAAAAATTACCGC 7369
||||| || ||||| || |||| || ||||| | || ||||| ||
Sbjct 1007966 CCACGATCTCCATACGGTGTTGCAAAATCATTTGCCTATTGGATTGTTGTCAATTATCGT 1008025
Query 7370 GAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCATGAATCACCGAGACGA 7429
|| |||| | | ||||||| | || || || ||||| ||||||||||| |||||
Sbjct 1008026 GAAGCTTATGAAATGTTTGCCGTCAATGGTATTCTATTCAATCATGAATCACCTAGACGT 1008085
Query 7430 GGTGCAGACTTTGTCACAAAGAAGATTAC-CGAGG-GTATCAAACAAATCATGAAGGGTG 7487
|||| | ||||||||| |||||||| || || || ||| |||| | |
Sbjct 1008086 GGTGAAACATTTGTCACACGTAAGATTACACGTGGTGTGGCAA--AAATTGTTCTTAATC 1008143
Query 7488 AAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGCGAGAGATTGGGGTCACGCGAAGG 7547
| | || ||||| ||||||||||| | | | |||||||||| || || |
Sbjct 1008144 GACAAGAATTCATCGAATTGGGTAATTTGGATTCAAAACGAGATTGGGGCCATGCACGTG 1008203
Query 7548 ACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCCGACGAATATGTAGTAG 7607
| ||||||||||| |||||| | ||| | |||||||| | | || || | ||| | |
Sbjct 1008204 ATTATGTTGAAGCCATGTGGTTAATGTTACAACAAGAAAATCCGGAAGATTTTGTCATTG 1008263
Query 7608 CAACGGGTGAGACCCATACAGT 7629
|||| ||||| | ||| ||||
Sbjct 1008264 CAACCGGTGAAGCACATTCAGT 1008285
>seq768
Length=1243675
Score = 100 bits (110), Expect = 3e-16
Identities = 326/499 (65%), Gaps = 17/499 (3%)
Strand=Plus/Plus
Query 168276 AACCCGTACCGATACCCTCTGTACCGTTCACGAGAACCATGGGGAGTGTTGGCATGTAGA 168335
||||||| ||||| || || | ||||||||||| | |||| | |||| |||||
Sbjct 748570 AACCCGTGCCGATGCCTTCCGCGCCGTTCACGAGCAGTTGCGGGATTACGGGCACGTAGA 748629
Query 168336 AGTCTGGCTCAATGGGGCGACCATCGTCATCCAAATAGTTGAGAATTGGATCATCT--CT 168393
| | |||||| ||||| ||||| | |||| || | || || ||| ||
Sbjct 748630 ACTTTGGCTCGATGGGCACGTTGTCGTCGTTTTGGTAGTCCAGCAGCGGCTCGTCTTCCT 748689
Query 168394 --CGGATCAAAGATCTTTCGGGCATCTTTTGTGAGCTTTGTAAAGATATACCTCGTTTGA 168451
|||| || || | ||| | | || | ||||| || |||||||| | |||
Sbjct 748690 GCCGGAACAT-GAAC---CGGCAAACGTTCGACAGCTTCGTGAAGATATAGCGCGTCGCG 748745
Query 168452 GACGCATCCTTACCACCCA---TGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGA 168508
||||| || || ||| || ||| | ||||||||||| ||||||||||| ||
Sbjct 748746 GACGCGTCGCGCCCGCCCTCTTTGCGAC---TGCCAAACTGACCGCACGGCTCAAGCAGG 748802
Query 168509 TTGATATTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAG 168568
|| | ||||| | || | | | | | ||||| || || | ||| | ||| | ||
Sbjct 748803 TTCAGGTTGTTCGTTCCGACGAACTGCTGCGCCATGTTCACGACCGTCTGCGCAATCGAT 748862
Query 168569 ACTTCACCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTC 168628
|||| ||||||||||| || |||||||| | || ||||||||||| |||
Sbjct 748863 TCTTCGCCGTGGTGGTAGCTGCTGACGTCTGCGACGTAGCTTGCGAACTGCGCCACCTTC 748922
Query 168629 ATCTC--ATC-CTTGAGATTCTTGTGGAAGCATGCGTACATAACCTTGCGTTGCGAAGGC 168685
|| || | | | ||| ||||| | ||| |||||| || ||||| |||| |||
Sbjct 748923 ATTTCCGAGCGCACGAGGTTCTTTTTGAACGCGCCGTACAGCACTTTGCGCTGCGCCGGC 748982
Query 168686 TTGAGACCATCCGCCATGTGTGCGATAGAACGCTTCAAGTCCGCCAAACTGAAGTTGACG 168745
|| || || ||| |||||| | || || |||| || ||| | ||| || |||
Sbjct 748983 TTCAGCCCGTCCACCATGTTCGGAATCGAGCGCTGCACGTCGTACCGACTAAACAGCACG 749042
Query 168746 AGGTCCTTGTGTACAAAGT 168764
|| ||||||| | |||||
Sbjct 749043 AGCTCCTTGTTGATAAAGT 749061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583251161615280
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