Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq335 392 4e-104
>seq335
Length=939964
Score = 392 bits (434), Expect = 4e-104
Identities = 845/1242 (68%), Gaps = 30/1242 (2%)
Strand=Plus/Minus
Query 78712 CCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCG 78771
|| ||| ||| ||||| || | ||| || |||| | || | |||||| ||||| |||
Sbjct 179903 CCTTCGCTCGCGGGCGAGCCTTCGAAGCTCGCGTACGGCCCGTGCTCCTTCGCGAGCTCG 179844
Query 78772 CATGACTCGAG--CAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGC 78829
| | |||| | || || || ||| | | |||||||||| |||||| | |||
Sbjct 179843 -ACG-CTCGCGGTCACCGCGCCGAAGTAGATCGTCTCGAAGATGTTCTTGTTCACTTCGT 179786
Query 78830 GCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGA-CATCGGCCAGGCCCTGG 78888
||||| || |||||||| || | |||| | || || | || || | ||| ||
Sbjct 179785 TCGCCTCGGGGCTGTCGAACGGCAGCCGCAGCAGC-TGCAGCGCGTCCGCGAAGCCTTGC 179727
Query 78889 ACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAA 78948
|||||||| ||||||| ||||| |||| |||||| || ||| ||||||| |||
Sbjct 179726 ACGCCGATGCCGATCGGCCGGTGCCGCAGGTTGCTGCGCCGCGCCTTCTCGGTCACGTAG 179667
Query 78949 AAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAAT 79008
||| | ||||| ||| ||||||||| |||| |||| | | |||||| |||
Sbjct 179666 AAGCCCACGTCGATCACGTTGTTCAGGTTCTGCGTCACGATCTTCGCGACCTCGAACAGC 179607
Query 79009 TTGGCGAAATCAAAATGAT--TTC----CTTTGATGAAAGTCGGTAGGCACAGCGATGCC 79062
|| || | | || | ||| | | | | | | || || ||||||| ||
Sbjct 179606 TTCTCGTAGTTGAAGCGCCGCTTCTCGACGTCCACGTACGCGGGCAGCGACAGCGACGCG 179547
Query 79063 AGGTTGCACACGGCCGTCTCGTCCGGGCTA-GAAACCTCGATGATTTCTGTGCACAAATT 79121
||||||||||| || |||| || | || | | || | | ||| ||||||| ||
Sbjct 179546 AGGTTGCACACCGCGATCTCCTC-GCGCGACGTGTACTGCACCACTTCCGTGCACAGGTT 179488
Query 79122 AGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTA 79181
|| |||| ||||||||||| |||| |||||| ||| ||| || |||||||||||
Sbjct 179487 CGAGGACTGGATGGTGCCGAGGTTCCGCTGGTTCGACTTGCGGTTGCACGCGTCCTTGTA 179428
Query 79182 GCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACG-CCGTCCCAGATGTCCC 79240
|| |||||| | || ||||| | ||| | || | || | |||||| ||| | |
Sbjct 179427 CACCAAGTACGGATTGCCCGTCTCGATCTGCGTGTTCACAATGACCGTCC-AGAGCGCGC 179369
Query 79241 GGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGA 79300
| ||| || | | | | || || || |||| | ||||| | ||| ||
Sbjct 179368 GCGCCTTCACCTGCCGCACGAAGCGCTGCTCGGCCTCGTAGCGCGTGTACAGCGCGTCGA 179309
Query 79301 AAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGG-CACATCAGGTGCCAG 79359
| || | || |||| ||| || |||||| ||| | ||||| |||||||| |||
Sbjct 179308 ACTCCGCGCCCCAGACTTCGAACAAGCCCGGCGACT-GCGCGGGACACATCAGACTCCAC 179250
Query 79360 TCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGG 79419
| |||| | || || |||||| | ||| ||| |||| || |||||||
Sbjct 179249 ACGCCGTCTTCGTCCACGCGGCGCATGAACAAGTCGTTGATGTACAGCCCCAGGAAGAGG 179190
Query 79420 TCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATG 79479
|| || |||| ||| |||| ||| ||||| | |||||||||| || || | ||||
Sbjct 179189 TCCCGCGTGCGCAACTCTTCGTTGCCGTGGTTGCGCCGCAGCTCGATGAACTCGAAGATG 179130
Query 79480 TCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGG 79539
|| ||||||||||||||||| ||||| ||||| || |||||||||||||||||||||
Sbjct 179129 TCTGCGTGCCACGGCTCCAGGTAGATCGCGAAGCCGCCTTTGCGCTTGCCGCCGCCCTGG 179070
Query 79540 TTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACG 79599
| |||||| || || || |||||| || || ||||| |||||||| |||| | |
Sbjct 179069 TCGACGTAGCGCGCGGTCGCGTTGAACACGCGCAGCATCGGCACGATCCCGTTGCTGCGC 179010
Query 79600 CCGTTCGTCCCGTTGA--TTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTG-GATTCCG 79656
|||||||| || || | || || | |||| || || || | | | | || |||
Sbjct 179009 CCGTTCGTGCCCGCGATGTACGCGTTC--GTCGCGCGGATCTT-GTGGATCGCGAGCCCG 178953
Query 79657 ATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCG 79716
|| || || | ||||| ||| |||||||||||| ||||| ||| | |||||||||
Sbjct 178952 ATCCCGCCAGCGTACTTGCTGATCACCGCGCACTCCTTCAGCGTGTCGAAAATGCCCTCG 178893
Query 79717 ATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCG 79776
||||||||||| ||| | ||| |||||||| || | |||| | ||| |||
Sbjct 178892 ATCGAGTCGTCGGCCATCTGCAGCAGAAAGCAGCTGGAGAGCTGTTGCCGCTTCAGCCCG 178833
Query 79777 GCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCT---CATCAGATCGTAC 79833
|||||||| || |||||||||||||| |||| ||||| ||| |||||| ||||
Sbjct 178832 GCGTTGAACAGCGTCGGCGTCGCGTGGATGAAAAACTT---GCTCGACATCAGCCGGTAC 178776
Query 79834 GTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGG 79893
|||||| | ||||| | |||| | |||||| |||||| ||||||||||| | |
Sbjct 178775 GTCTCCAAAATCCGCGGCAAGTCGCCCAAGTGGATCGCGACCGACACGCGCATGAACATG 178716
Query 79894 TACTGGGGCGTCTCGCCGACATTCAGGTAGCCCTTCTGCAGG 79935
||||| ||| |||| ||| || || ||||| |||||
Sbjct 178715 TACTGCGGCCGCTCGACGATCTTTTTGTTCGCCTTCAGCAGG 178674
Score = 333 bits (368), Expect = 3e-86
Identities = 1160/1783 (65%), Gaps = 82/1783 (5%)
Strand=Plus/Plus
Query 19102 GCCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGT 19161
||| |||||| | |||||||| || |||||| ||||| | |||| | ||||| |
Sbjct 178707 GCCGCAGTACATGTTCATGCGCGTGTCGGTCGCGATCCACTTGGGCGACTTGCCGCGGAT 178766
Query 19162 CCGCGAGACATACGACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTT 19220
||||| ||| |||||| | || ||||| |||| |||||||||||||| || |
Sbjct 178767 TTTGGAGACGTACCGGCTGATGT-CGAGCAAGTTTTTCATCCACGCGACGCCGACGCTGT 178825
Query 19221 TCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATG 19280
|||||||||| ||| | ||| | || ||||| || || || ||| || |
Sbjct 178826 TCAACGCCGGGCTGAAGCGGCAACAGCTCTCCAGCTGCTTTCTGCTGCAGATGGCCGACG 178885
Query 19281 ACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCG 19340
|| || |||||||| | ||| ||||| |||||||||||| ||| ||||| | |
Sbjct 178886 ACTCGATCGAGGGCATTTTCGACACGCTGAAGGAGTGCGCGGTGATCAGCAAGTACGCTG 178945
Query 19341 GGGGTATCGGGATC-CACTGCTCGAATATCCGGTCGAGTGGTACACG--AATCAATGGGA 19397
| || |||||| || | | | | || ||||| || | | || || ||| || |
Sbjct 178946 GCGGGATCGGGCTCGCGATCCAC-AAGATCCG--CGCGACGAACGCGTACATCGCGGGCA 179002
Query 19398 CGAAC-GGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGG 19456
||||| || | || | |||| ||||| || ||||| ||||| |||||| || || |
Sbjct 179003 CGAACGGGCGCAG-CAACGGGATCGTGCCGATGCTGCGCGTGTTCAACGCGACCGCGCGC 179061
Query 19457 TACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGG 19516
|||||| ||||||| |||||||| ||||| ||| ||||| |||||||| ||||| |||
Sbjct 179062 TACGTCGACCAGGGCGGCGGCAAGCGCAAAGGCGGCTTCGCGATCTACCTGGAGCCGTGG 179121
Query 19517 CACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGC 19576
||||| ||| || | || ||| |||| ||||| | ||||| || |||| ||| |||||
Sbjct 179122 CACGCAGACATCTTCGAGTTCATCGAGCTGCGGCGCAACCACGGCAACGAAGAGTTGCGC 179181
Query 19577 TGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAG 19636
|| ||||||||| || ||| || ||| | |||||| || || |
Sbjct 179182 ACGCGGGACCTCTTCCTGGGGCTGTACATCAACGACTTGTTCATGCGCCGCGTGGACGAA 179241
Query 19637 GACGAAGAATGGCACCTGATGTG-CCCGCACGAATGCCCTGGCCTACCCGACGTCTACGG 19695
|||| | ||| |||||||| ||||| | | | || ||| | ||| |||| ||
Sbjct 179242 GACGGCGTGTGGAGTCTGATGTGTCCCGCGC-AGTCGCCGGGCTTGTTCGAAGTCTGGGG 179300
Query 19696 CGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGT 19755
|| || |||| | | | ||||| | |||| ||| || || ||| | | |||
Sbjct 179301 CGCGGAGTTCGACGCGCTGTACACGCGCTACGAGGCCGAGCAGCGCTTCGTGCGGCAGGT 179360
Query 19756 CCGGGCCCGGGACGTCTGGGACCG-CGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGT 19814
||| || | ||| |||| | | | | || | ||| ||||||| |||| ||||
Sbjct 179361 GAAGGCGCGCGCGCTCT-GGACGGTCATTGTGAACACGCAGATCGAGACGGGCAATCCGT 179419
Query 19815 ACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCA 19874
|| || ||||||||||| ||| |||||| || ||| |||| ||||| | |||
Sbjct 179420 ACTTGGTGTACAAGGACGCGTGCAACCGCAAGTCGAACCAGCGGAACCTCGGCACCATCC 179479
Query 19875 AGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCG---GACGAGACTGCCG 19931
|||| || |||||||| || ||| | || || | || | || || |||| || |
Sbjct 179480 AGTCCTCGAACCTGTGCACGGAAGTGGTGCAG---TACACGTCGCGCGAGGAGATCGCGG 179536
Query 19932 TGTGTAATCTGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCC-----TCCTC-CTTCG 19985
|||| || || ||||| |||| ||||| | | ||| | | | | | ||||
Sbjct 179537 TGTGCAACCTCGCGTCGCTGTCGCTGCCCGCGTACGTGGACGTCGAGAAGCGGCGCTTCA 179596
Query 19986 ACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCG 20045
||| | || ||| |||||| | | |||| |||| || ||||| ||| ||||
Sbjct 179597 ACTACGAGAAGCTGTTCGAGGTCGCGAAGATCGTGACGCAGAACCTGAACAACGTGATCG 179656
Query 20046 ATCGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCG 20105
| | ||| ||| ||||||| |||||| || |||| |||||||||||||
Sbjct 179657 ACGTGGGCTTCTACGTGACCGAGAAGGCGCGGCGCAGCAACCTGCGGCACCGGCCGATCG 179716
Query 20106 CGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATC 20165
|||||||| || ||| | || |||| | | |||| | || | |||||| |
Sbjct 179717 GCATCGGCGTGCAAGGCTTCGCGGACGCGCTGCAGCTGCTGCGGCTGCCGTTCGACAGCC 179776
Query 20166 CCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCT-CCTG 20224
|| ||||| ||| | |||||| |||||||||| | | ||| || || | | |
Sbjct 179777 CCGAGGCGAACGAAGTGAACAAGAACATCTTCGAGACGATCTACTTCGGCGCGGTGACCG 179836
Query 20225 GAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCG 20284
| ||| ||| ||||| || ||| |||| ||||||| || ||| | || |||||||||
Sbjct 179837 CGAGCGT-CGAGCTCGCGAAGGAGCACGGGCCGTACGCGAGCTTCGAAGGCTCGCCCGCG 179895
Query 20285 TCCGAGGGTATCCTCCAGCCGGACATGTGG----------GGCG-----------TCACT 20323
||| || | ||||| ||| ||||| |||| | |
Sbjct 179896 AGCGAAGGCAAATTCCAGTTCGACTTGTGGAACGAAGAACGGCGCGAGCGGAACTTGCGT 179955
Query 20324 GAGAATGAG----------TTTTGGA-------GCGC-CCTCAAGGTTGAGATCAAGACC 20365
|||| | || | | ||| | || | | ||| | |||||
Sbjct 179956 GAGATTCAGCTCTCGGGCATGTGGGACTGGGAGGAGCTGCGCGAGGCGATGGTCAAG--- 180012
Query 20366 CACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATC 20425
||||||| |||||| |||| |||||||| |||||||| || ||||| | ||||||
Sbjct 180013 TACGGGCTGCGCAACAGCCTGCTGGTCGCGCCGATGCCGACGGCGTCGACTTCGCAGATC 180072
Query 20426 ATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAAC--ATCTACTTGCGTCGTACAC 20483
| |||||| |||| | ||||||||||||||| | ||| | ||| || ||| | |
Sbjct 180073 CTCGGGAACTGCGAGTCGTTCGAGCCGTACACGTCGAACGTGTTTACGCGCCGCGTGCTC 180132
Query 20484 TGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCCGCGACTTGCAGAAGATCGATA 20543
| ||| |||||| | || | ||||||||| |||| | || | |||| |||
Sbjct 180133 AG--CGGCGAGTTCTGCGTGCTCAACAAGCACTTGGTGCTCGCGCTCTCGAAGCTCGGGC 180190
Query 20544 TGTGGTCGCCCAAAATTAAGAATGAAATTGTCCGAGC-CGGCGGGAGCGTCCAG-GCAT- 20600
|||||||| | ||| | | | | || || | ||| || ||| ||
Sbjct 180191 TGTGGTCGGAGGCGCTGAAGCA-GCAGCTCATCGCGCACAACGGCTCGGTGCAGCTGATC 180249
Query 20601 -TGGATATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAG 20659
||| ||||| ||| || |||| | | || ||| ||||| ||| |||
Sbjct 180250 GAGGAAATCCCGCAGCCGCTGAAGGCGCTGTTCAAGACGACCTGGGAGATCAAGCAGCGC 180309
Query 20660 AGCATCATCGACATGGCGGCCGATCGCGGCGCC-TACATCGACCAGTCCCAGTCGCTCAA 20718
||| |||||||||| ||| || ||| ||||| | |||| |||||| |||||||||
Sbjct 180310 AGCTACATCGACATGTCGGTCGCGCGC-GCGCCGTTCATCTGCCAGTCGCAGTCGCTCTC 180368
Query 20719 TGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCA 20778
||||| | | |||||| | | ||||| |||||| | |||| ||| |
Sbjct 180369 GCTCTTCGCCGCGCGGCCGAGCTTTGGTGCGCTGACGAGCATGCACTTTTACGCGTGGAA 180428
Query 20779 CAAGGGGCTCAAGACGGGCATGTACTATCTGCGGA-CCCGAGC 20820
| |||||||| ||||| | ||||| ||||| | || ||||
Sbjct 180429 ACAAGGGCTCAAAACGGGACTCTACTACCTGCGCATCCAGAGC 180471
Score = 132 bits (146), Expect = 5e-26
Identities = 342/509 (67%), Gaps = 13/509 (3%)
Strand=Plus/Plus
Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGCTC 59672
|| || ||| ||| |||||| |||||||| | | ||| || | || |||||| |||
Sbjct 899783 TCCTTTTGGACCGCCGAGGAAATTGACCTGTCTGCCGACTTGGACGACTGGGACGCGCTG 899842
Query 59673 AATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGA 59732
|| ||| |||| ||| ||||||||| || || || || ||||||||||| || ||
Sbjct 899843 AAGGACGGTGAGCGGCACTTCATCAAGCACGTGCTCGCGTTTTTCGCGGCGAGCGACGGC 899902
Query 59733 ATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCCCGG 59792
|| ||| | || ||| | | || ||||| || | ||| | ||| | |||
Sbjct 899903 ATCGTGCTCGAGAATCTCGCCAGCCGCTTTTTGGTCGAAATGCAGCTGCCCGCTGTCCGC 899962
Query 59793 TCGTTCTACGCGTATCAGTCGTTC--AACGAGTCTATCCACTCCGAGACGTACTCGCTCA 59850
||| ||||||| ||| ||| | || |||||||| ||||||||| |
Sbjct 899963 GAGTTTTACGCGTTCCAG--GTTGCGATGGAAAACATCCACTCGGAGACGTACAGCTTGC 900020
Query 59851 TGATCGATAAGTTGGTCAAGGATCCGGAAGAG--AAGGCTG-GTCTGTTCCGTGCCATAG 59907
||||||| | | || | | | || || || |||| | || | || || || |
Sbjct 900021 TGATCGACACCTACCTCGCGCAGCAGGCCGACGAAAAGCTGCGGTTGCTGCGCGCAATCG 900080
Query 59908 AG-ACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTC-CTGG 59965
|| |||| || || || |||| || || || ||||| | ||||||| | || |
Sbjct 900081 AGCACGTGCCG-GCGGTCAAACGCAAGGCGGAGTGGGCGGTCAAGTGGATCACAGGCTCG 900139
Query 59966 AGCATCATTTGCACAACGTCTCATAGC-TTTTGCATGCGTGGAAGGAATCTTCTTCTCTG 60024
| | || | || |||| || | || |||||| | || ||||| ||||| ||| |
Sbjct 900140 AAC-TCGCTCGCGGAACGCCTGCTCGCGTTTTGCGCG-GTCGAAGGCATCTTGTTCAGCG 900197
Query 60025 GCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCT 60084
||||||| || || || ||||||||||| ||||| ||||| |||| || || ||||||
Sbjct 900198 GCTCGTTTTGCGCGATCTTCTGGCTCAAGAAGCGCGGCCTGCTGCCCGGGCTCAGTTTCA 900257
Query 60085 CCAACGAGCTGATTTCCCGGGACGAGGGC 60113
|||||| ||||| || || ||||| |||
Sbjct 900258 GCAACGAACTGATCTCGCGCGACGAAGGC 900286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548515735627680
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