Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq335 192 7e-44 seq1 152 6e-32 seq768 131 2e-25 seq391 131 2e-25 seq558 118 1e-21 >seq335 Length=939964 Score = 192 bits (212), Expect = 7e-44 Identities = 1004/1586 (63%), Gaps = 85/1586 (5%) Strand=Plus/Minus Query 80331 CACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTT 80390 ||| | ||||||||| | || | ||||| || ||| ||| ||| | ||| ||| Sbjct 180168 CACCAAGTGCTTGTTGAGCACGCAGAACTCGCCGCTGAGCACGCGGCGCGTAAACACGTT 180109 Query 80391 TGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGG 80450 | ||||| ||||| || | |||| ||| ||||||||||| | || ||||||||| Sbjct 180108 CGACGTGTACGGCTCGAACGACTCGCAGTTCCCGAGGATCTGCGAAGTCGACGCCGTCGG 180049 Query 80451 CATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATC 80510 |||||| |||||| ||| || ||||| |||| ||| || ||||||||| || Sbjct 180048 CATCGGCGCGACCAGCAGGCTGTTGCGCAGCCCGTACTTGACCATCGCCTCGCGCAGCTC 179989 Query 80511 --------------TGACCAAAA-----ATCAACCCCAA----CGCTGTGACC------- 80540 || || | | ||| | ||| |||| || Sbjct 179988 CTCCCAGTCCCACATGCCCGAGAGCTGAATCTCACGCAAGTTCCGCTCGCGCCGTTCTTC 179929 Query 80541 ---CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTA 80597 ||||| |||| ||| || |||| || ||| || || || |||| || |||| Sbjct 179928 GTTCCACAAGTCGAACTGGAATTTGCCTTCGCTCGCGGGCGAGCCTTCGAAGCTCGCGTA 179869 Query 80598 CGGGCCCTCCGTCTTGGCCAGCTCACACGA-CTCCATAAGGGCCGCGTGATAAATGCACT 80656 ||| || | | ||| || ||||| ||| | | | | || || || || || Sbjct 179868 CGGCCCGTGCTCCTTCGCGAGCTCG-ACGCTCGCGGTCACCGCGCCGAAGTAGATCGTCT 179810 Query 80657 CAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCA 80716 | |||| | ||||||||| || ||||| ||| |||||||| || | || || | Sbjct 179809 CGAAGATGTTCTTGTTCACTTCGTTCGCCTCGGGGCTGTCGAACGGCAGCCGCAGCAGCT 179750 Query 80717 TGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATC 80776 | | |||| || | ||| || ||||||||| ||||||| ||||| ||| ||| | Sbjct 179749 GCAGCGCGTCCGCGAAGCCTTGCACGCCGATGCCGATCGGCCGGTGCCGCAGGTTGCTGC 179690 Query 80777 GCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAA 80836 || |||| | | ||| ||| ||||| ||| ||||||||| | || | Sbjct 179689 GCCGCGCCTTCTCGGTCACGTAGAAGCCCACGTCGATCACGTTGTTCAGGTTCTGCGTCA 179630 Query 80837 CAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGG---TTCCCC---TTCACAA 80890 | | | | || || || |||| ||| ||| | ||| | | ||| Sbjct 179629 CGATCTTCGCGACCTCGAACAGCTTCTCGTAGTTGAAGCGCCGCTTCTCGACGTCCACGT 179570 Query 80891 ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCA-GCATCTGTAAAC 80949 | || || || ||| ||||| || |||||||| || | ||| || || | || || Sbjct 179569 ACGCGGGCAGCGACAGCGACGCGAGGTTGCACACCGCGATCTCCTCGCGCGAC-GTGTAC 179511 Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009 | || | ||||||||||| || || |||| || || || ||||| |||||| ||| Sbjct 179510 TGCACCACTTCCGTGCACAGGTTCGAGGACTGGATGGTGCCGAGGTTCCGCTGGTTCGAC 179451 Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069 ||| |||||| ||||||||||| || |||||| | || ||||||| ||| | || Sbjct 179450 TTGCGGTTGCACGCGTCCTTGTACACCAAGTACGGATTGCCCGTCTCGATCTGCGTGTTC 179391 Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGC-CT--TCGGCC 81126 | ||| | ||| | | |||||||||| ||||| || | || || |||||| Sbjct 179390 ACAATGACCGTCCAGAGCGCGCGCGCCTT---CACCTGCCGCACGAAGCGCTGCTCGGCC 179334 Query 81127 ACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCA 81185 | || | ||| ||| ||||||||| || || | ||| | | | || | Sbjct 179333 TCGTAGCGCGTGTACAGCG-CGTCGAACTCCGCGCCCCAGACTTCGAACAAGCCCGGCGA 179275 Query 81186 CTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTC 81245 || || |||||||| ||| || ||| | || || |||||| ||| Sbjct 179274 CTGCGCGGGACACATCAGACTCCACACGCCGTCTTCGTCCACGCGGCGCATGAACAAGTC 179215 Query 81246 AGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAG 81305 ||| | || | ||| ||||| || |||| ||| || | || |||||| | Sbjct 179214 GTTGATGTACAGCCCCAGGAAGAGGTCCCGCGTGCGCAACTCTTCGTTGCCGTGGTTGCG 179155 Query 81306 GCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGA 81365 |||| ||||| || || | |||||| || ||||| |||||||| || | |||| Sbjct 179154 CCGCAGCTCGATGAACTCGAAGATGTCTGCGTGCCACGGCTCCAGGTAGATCGCGAAGCC 179095 Query 81366 CCCCTTGCGA---CGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAA 81422 || ||||| | ||| ||||||| |||||| || || |||||||| || || |||| Sbjct 179094 GCCTTTGCGCTTGCCGCCGCCCTGGTCGACGTAGCGCGCGGTCGCGTTGAACACGCGCAG 179035 Query 81423 CATAGGGATGATACCATCTGACTGA--CCGTTCGTACCCACGAT--ACGCGACCCCTTGG 81478 ||| || | ||| || | || ||| |||||||| ||| |||| ||||| | | | Sbjct 179034 CATCGGCACGATCCCGT-TG-CTGCGCCCGTTCGTGCCCGCGATGTACGCGTTCG--TCG 178979 Query 81479 CGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTT--TGAAATCTGAGCACA 81536 |||| | |||| ||| | || ||||| || || | |||| ||| | | |||| Sbjct 178978 CGCGGATCTTGTGGATCGCGAGCCCGATCCCGCCAGCGTACTTGCTGATCACCGCGCACT 178919 Query 81537 CCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACA 81596 || |||| || || |||| |||||||| || | ||| | |||| || || Sbjct 178918 CC--TTCAGCGTGTCGAAAATGCCCTCGATCGAGTCGTCGGCCATCTGCAGCAGAAAGCA 178861 Query 81597 GCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAA 81656 ||| || | ||| | | || ||||| |||||||| || || |||||||| ||||| Sbjct 178860 GCTGGAGAGCTGTTGCCGCTTCAGCCCGGCGTTGAACAGCGTCGGCGTCGCGTGGATGAA 178801 Query 81657 ATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAAT 81716 | | | | |||||||| || || ||| | || || | ||| | ||| || Sbjct 178800 AAACTTGCTCGACATCAGCCGGTACGTCTCCAAAATCCGCGGCAAGTCGCCCAAGTGGAT 178741 Query 81717 ACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCGCC------TGCGTT------ 81764 ||| | || ||||| ||||||||||| ||| |||| | | ||| Sbjct 178740 CGCGACCGACACGCGCATGAACATGTACTGCGGCCGCTCGACGATCTTTTTGTTCGCCTT 178681 Query 81765 ---CAGGTACATCTTCTGCAAAGTCTTGATGCCGAAGTAACCGAACCCGTAGTCGCGTTC 81821 ||||||| || | ||||||| ||||||||| ||||| || ||| ||||| Sbjct 178680 CAGCAGGTACGAGCGCTCGAGCGTCTTGAAGCCGAAGTAGTCGAACTCGAAGT--CGTTC 178623 Query 81822 GC--TGTCGATCACAGCATCTAGCTC 81845 || | ||||| | || || ||||| Sbjct 178622 GCCGAGACGATCGCCGCGTCCAGCTC 178597 >seq1 Length=3593316 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || | || || || || || || | || ||||| || | Sbjct 1032510 ATGCAAATTTTCGTGAAAACATTGACTGGTAAAACCATCACATTAGACGTTGAACCATCT 1032451 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | |||| ||||||| ||||||||||| || ||||||||||| ||||||||| Sbjct 1032450 GATACAATCGAAAATGTGAAGGCAAAAATTCAGGATAAAGAGGGAATTCCACCAGACCAG 1032391 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || ||||| ||||| ||| | || |||| |||||| || | || || || Sbjct 1032390 CAACGTTTGATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACATTATCGGATTACAAC 1032331 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||| || || ||| | ||| | || |||||||| || ||||| Sbjct 1032330 ATCCAAAAAGAGTCAACTTTGCATTTGGTATTGCGTCTACGTGGTGG 1032284 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || |||||||| || |||||||| | || || ||| || | Sbjct 1032282 ATGCAAATTTTCGTCAAAACTCTTACCGGTAAAACTATTACATTGGAAGTCGAGCCATCT 1032223 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | |||| | || || ||||| |||||||| ||||||||||| ||||| ||| Sbjct 1032222 GATACGATCGAAAATGTAAAAGCCAAAATCCAGGACAAAGAGGGAATTCCCCCAGATCAG 1032163 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || ||||| || |||||| | || |||| | || | | || || || Sbjct 1032162 CAACGATTGATCTTTGCCGGAAAGCAATTGGAAGATGGAAGAACTTTGTCCGATTACAAC 1032103 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||| || | ||| | || || ||||| || ||||| Sbjct 1032102 ATTCAAAAGGAATCGACATTGCATTTGGTTTTACGTCTCCGTGGTGG 1032056 Score = 136 bits (150), Expect = 5e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || | || ||||| || |||||| | || || || || Sbjct 1033253 ATGCAAATTTTCGTAAAAACTTTGACTGGCAAAACCATTACTTTGGAAGTCGAACCATCG 1033194 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | |||| |||| |||||||| ||||| || || || ||||| ||||| ||| Sbjct 1033193 GACACTATCGAAAATGTGAAAGCTAAAATCCAGGATAAAGAAGGTATTCCACCAGATCAG 1033134 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || ||||||||||| |||||||| |||| || || | | || |||||| Sbjct 1033133 CAACGATTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGAACATTGTCGGATTATAAT 1033074 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | ||||| |||||||| | ||| | || |||||| | || |||||| Sbjct 1033073 ATACAAAAAGAATCCACCTTACATTTGGTATTGCGTTTACGTGGTGGA 1033026 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || |||||||| || | || || || || ||||| | || || || | Sbjct 1032738 ATGCAGATTTTTGTCAAAACTTTGACTGGTAAAACCATTACATTGGAAGTGGAACCCTCG 1032679 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| |||| | ||||||||||| || ||||| || |||||||| ||||||||| Sbjct 1032678 GATACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGAATTCCACCAGACCAG 1032619 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | ||||| ||||| || || || || |||| || || | | || || || Sbjct 1032618 CAACGTTTGATTTTCGCTGGCAAACAGCTTGAAGATGGCCGAACATTGTCGGATTACAAC 1032559 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| ||||| || |||||||| || ||||| | || ||||| Sbjct 1032558 ATTCAAAAAGAATCGACACTTCATCTCGTATTGCGATTACGTGGTGG 1032512 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||||||||| || || || | || || || || || ||| | || || || || Sbjct 1033484 ATCATGCAAATCTTCGTAAAAACATTGACTGGTAAAACCATCACTTTGGAAGTCGAACCA 1033425 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | ||| | |||| | || || |||||||| || || || || ||||| ||||| Sbjct 1033424 TCGGACACCATCGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGCATTCCACCAGAT 1033365 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||| || | || ||||||||||| ||| | || |||| |||||| | | || ||| Sbjct 1033364 CAGCAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTGTCCGATTAT 1033305 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| | ||||||||||| || | ||| | || |||||||| || || || Sbjct 1033304 AATATTCAAAAGGAATCAACATTGCATTTGGTATTGCGTCTACGTGGCGG 1033255 >seq768 Length=1243675 Score = 131 bits (144), Expect = 2e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||||||||| || |||||||| || || |||| || || |||||||| || || Sbjct 1130925 ATGATGCAAATCTTCGTGAAGACGCTCACGGGGAAGAACATCACCCTTGAGGTGGACCCA 1130866 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | || | | | || ||||| || |||||||||||||| ||||| || ||| Sbjct 1130865 AACGACACGATCGAGAGCGTCAAAGCTAAGATCCAGGACAAGGAGGGCATTCCGCCGGAC 1130806 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||||| |||||||| || ||||| | || || | || || || || ||||| Sbjct 1130805 CAGCAGCGTCTGATTTTTGCCGGGAAGCAGTTGGATGACGGGCGCACGCTCGCGGACTAC 1130746 Query 27583 AATGTCCAAAAGGAATCCAC 27602 || |||||||||| || || Sbjct 1130745 AACATCCAAAAGGAGTCGAC 1130726 Score = 98.7 bits (108), Expect = 1e-15 Identities = 169/242 (70%), Gaps = 5/242 (2%) Strand=Plus/Minus Query 31961 AGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACG 32020 |||| || ||||| || ||| |||||| || ||||| | |||||||| ||| | |||| Sbjct 749016 AGCGCTCGATTCCGAACATGGTGGACGGGCTGAAGCCGGCGCAGCGCAAAGTGCTGTACG 748957 Query 32021 CCTGCCTCAAGAAGAACCTGTCGAGT---GACATGAAGGTGGCGCAGCTGTCGGGCTACG 32077 | |||| |||||||| | | || ||||||||||||||| | | |||||| Sbjct 748956 GCGCGTTCAAAAAGAACCTCGTGCGCTCGGAAATGAAGGTGGCGCAGTTCGCAAGCTACG 748897 Query 32078 TGGCAGA-GCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAAC 32136 | ||||| | | | || || ||||||||||| | ||| | | || | || ||| Sbjct 748896 TCGCAGACGTCAGCAGC-TACCACCACGGCGAAGAATCGATTGCGCAGACGGTCGTGAAC 748838 Query 32137 CTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTT 32196 | || ||| | || ||||| | || ||||||||| | || ||||| | || |||||| Sbjct 748837 ATGGCGCAGCAGTTCGTCGGAACGAACAACCTGAACCTGCTTGAGCCGTGCGGTCAGTTT 748778 Query 32197 GG 32198 || Sbjct 748777 GG 748776 >seq391 Length=841353 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || | || || || | |||| |||| || || ||| || Sbjct 251160 ATGCAAATTTTTGTAAAAACTTTGACAGGAAAAAATATTTCTCTCGAAGTAGAGCCAAAC 251101 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || |||| | ||||||||||| || || || ||||| || || || Sbjct 251100 GATACCATTGAAAGCGTGAAAACGAAAATTCAGGATAAAGAAGGGATTCCGCCTGATCAA 251041 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| ||||||||||||| |||||||| || ||| || || | |||| || || Sbjct 251040 CAGCGGTTAATTTTTGCTGGAAAGCAACTTGACGATTCGCGGACATTGTCAGATTACAAC 250981 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620 | ||||||||||| ||| | ||||| || ||||| Sbjct 250980 ATTCAAAAGGAATCAACTTTGCATCTGGTGTTGCG 250946 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || | || || || | |||| | |||||||| || | | Sbjct 251616 ATGCAGATATTTGTAAAAACATTAACAGGTAAAAATATTTCGCTTGAGGTAGAACCCACT 251557 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| |||| | ||||||||||| ||||| |||||||| || || || Sbjct 251556 GACACAATTGAAAATGTGAAAACGAAAATTCAGGATAAGGAAGGAATTCCGCCTGATCAA 251497 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || ||||||||||||| || ||| | || ||| | | || | ||||||| ||| Sbjct 251496 CAACGATTAATTTTTGCTGGAAAACAATTAGAAGATTCTAGAACTTTGTCAGACTACAAT 251437 Query 27586 GTCCAAAAGGAATCCAC 27602 |||| || ||||| || Sbjct 251436 ATCCAGAAAGAATCGAC 251420 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || | || || |||| ||||| || ||||| || || | Sbjct 731052 ATGCAGATTTTCGTGAAAACATTAACAGGGAAGAACATTACCCTGGAGGTGGAACCAAAT 730993 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| | || | ||||| || ||||| || |||||||| || || ||| Sbjct 730992 GACACTATTGAGTCCATCAAAACCAAAATCCAAGACAAAGAAGGAATTCCCCCGGATCAG 730933 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || |||||||||||||||||||| || || | || || || | ||||| || Sbjct 730932 CAAAGACTTATTTTTGCTGGTAAGCAACTAGACGACAACCGCACTTTATCCGACTACAAC 730873 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || |||||||| ||||| |||| | |||||| | || || Sbjct 730872 ATCCAGAAAGAATCCACAATTCATTTAGTGCTTCGTCTTAGAGGAGG 730826 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 || ||||| ||||| ||||| | || || || | ||| || | || || || | Sbjct 251388 ATACAAATTTTTGTAAAGACCTTAACAGGAAAAAATATATCTTTGGAAGTCGAACCCAAC 251329 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| | | | ||| |||||||||||||| || || ||||| |||||||| Sbjct 251328 GACACTATTGAGAGTGTAAAGATGAAAATTCAGGACAAAGAAGGGATTCCGCCAGACCAA 251269 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| ||||||||||||| || || | || ||| | | || | ||||||| ||| Sbjct 251268 CAGCGATTAATTTTTGCTGGAAAACAGTTAGAAGATTCTAGAACTTTGTCAGACTACAAT 251209 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || |||||||| | || |||| | || ||| | ||||| Sbjct 251208 ATCCAGAAAGAATCCACATTACACTTAGTGCTTCGACTTAGAGGTGG 251162 >seq558 Length=611125 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| || ||||||||||| || || ||||||| || || || || || || || Sbjct 303711 ATGATGCAGATATTTGTCAAGACACTCACGGGCAAGAACATAACGCTCGAAGTGGACCCA 303770 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | || | | | || ||||| || |||||||| ||||| ||||| || ||| Sbjct 303771 AACGACACGATCGAGAGCGTCAAAGCTAAGATCCAGGACAAAGAGGGCATTCCGCCGGAC 303830 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| | || ||||| || ||||| ||||| || | || || || || ||||| Sbjct 303831 CAGCAGCGCTTGATCTTTGCGGGGAAGCAGCTCGACGACGGACGCACGCTCGCGGACTAC 303890 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | || || || |||||| |||| | || |||| || ||||| || Sbjct 303891 AACATTCAGAAAGAGTCCACTATTCACTTGGTACTGCGACTGCGCGGCGG 303940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570300975620640