Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq1201 113 5e-20 >seq1201 Length=163172 Score = 113 bits (124), Expect = 5e-20 Identities = 205/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 32661 ATAGCCAGAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATT 32720 || |||| |||| | |||| |||||||| || |||| || |||| | ||||| || Sbjct 82606 ATCGCCATAGCCATTTGGTGGTATTTTATATCGAAAGCAATCGAATTAATCGATACAATG 82547 Query 32721 TTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTT 32780 || | ||||| | | |||| || || ||| ||||| || | || ||||||| Sbjct 82546 TTAATAATAATTAAACGTAAATCAAATCAGCTTACATTTTTACATATCTATCACCATTCA 82487 Query 32781 ACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAGGCATTTTTT 32840 || ||||||| | | | ||| | || |||| | | || ||| |||| || Sbjct 82486 ACAATGTTTATTGTTTGGTGGGTTGGTTCGAAATTTGTACCCGGTGGATCGGCAGTTACC 82427 Query 32841 GGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTATTACGGATTAACAGCA 32900 || ||| | |||| | ||||| | | |||||||||||||| |||||| || || Sbjct 82426 GGTGCATTAGTTAATTGCCTGGTACATATACTGATGTATAGTTATTATGGATTAGCATCA 82367 Query 32901 ATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTAACTATCATACAATTG 32960 | ||| | | |||| |||| |||||||||||||||||||||| || ||||||||| Sbjct 82366 TTTGGTTCATGTTTGCAGCCATATTTATGGTGGAAAAAATATTTAACCATTATACAATTG 82307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603170832437280