Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 1e-24
seq391 123 2e-23
seq768 107 1e-18
seq558 93.3 3e-14
>seq1
Length=3593316
Score = 127 bits (140), Expect = 1e-24
Identities = 169/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||| ||||| |||||||| | || || ||||| ||||||||||| ||
Sbjct 1031600 CCACCACGAAGTCGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGAC 1031659
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||||| | ||||| | |||||| |||||||| || |||||||| || || || ||
Sbjct 1031660 AATGTTCGACCATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGA 1031719
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCT--CTCC 34656
| || || |||||| ||| ||||| ||| || | || || || || | |||
Sbjct 1031720 ATACCTTCTTTGTCTTGGAT-TTTTGCTTTGACATTTTCGATAGTATC--CGATGGTTCC 1031776
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||||| ||| || ||||||||||| || ||||| || ||||| |||||
Sbjct 1031777 ACTTCCAAGGTGATGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCAT 1031826
Score = 116 bits (128), Expect = 2e-21
Identities = 157/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551
||||| || | ||| || || || ||||||||||| ||||| || | |||||| |
Sbjct 1032524 CGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGACAATGTTCGGCCA 1032583
Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611
|||||||| ||||| || || || || ||||| || ||||| || || | ||| || |||
Sbjct 1032584 TCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGAATTCCTTCTTTG 1032643
Query 34612 TCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTAT 34670
||| ||| ||| | || || | ||| || || | |||||||||| || ||
Sbjct 1032644 TCTTGGAT-TTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCACTTCCAATGTAAT 1032702
Query 34671 CGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||||||| || || ||||| ||||||||||||||
Sbjct 1032703 GGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
Score = 113 bits (124), Expect = 3e-20
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|||||||| |||||||| | ||| ||| ||||| ||||| ||||| || | ||| ||
Sbjct 1032293 AGACGCAATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCCGATAATGTACGA 1032352
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| | ||||||||||||||| || ||||| || ||||| || || | ||||||
Sbjct 1032353 CCATCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGTGGAATTCCCTCT 1032412
Query 34609 TTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|| || ||| ||||| || || | ||||| || || || || | ||
Sbjct 1032413 TTATC-CTGAATTTTTGCCTTCACATTTTCGATTGTATCAGATGGTTCAACGTCTAATGT 1032471
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| |||||||| || || |||||||| ||||| |||||
Sbjct 1032472 GATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCAT 1032510
Score = 109 bits (120), Expect = 3e-19
Identities = 171/239 (72%), Gaps = 7/239 (3%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | |||||||| |||||||| | || ||||||||||| |||||||| ||
Sbjct 1033255 CCGCCACGTAGACGCAATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCGGAC 1033314
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || | ||||| | ||||||||| ||||| || || || || || || || ||
Sbjct 1033315 AAAGTACGACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGA 1033374
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCT--CTCC 34656
| || || || ||| ||| ||| | |||||| | || ||||| || | ||
Sbjct 1033375 ATGCCTTCTTTATCT-TGAATTTTGGCTTTAACATTTTCGATGGTGTC--CGATGGTTCG 1033431
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG-TTGATTG 34714
||||||| || || |||||||| || || ||||| || || || |||||| |||||||
Sbjct 1033432 ACTTCCAAAGTGATGGTTTTACCAGTCAATGTTTTTACGAAGATTTGCATGATTGATTG 1033490
Score = 98.7 bits (108), Expect = 6e-16
Identities = 155/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||||||| | ||| || |||||||| || ||||| || | || ||
Sbjct 1031837 AGACGAAGCACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCGGATAAGGTACGG 1031896
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| | ||||||||| || || || ||||| || || || || || | || |||
Sbjct 1031897 CCATCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCC 1031956
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCT--CTCCACTTCCACGG 34666
|| ||| ||||| ||||| | ||||| || || | ||| ||||||| |
Sbjct 1031957 TTATCTTGAATCTTGGCTTTTACATTTTCGATTGTATC--CGATGGCTCGACTTCCAAAG 1032014
Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| ||||||||||| |||| || || || ||||| |||||
Sbjct 1032015 TGATCGTTTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1032054
Score = 96.9 bits (106), Expect = 2e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| || |||||||| | || |||||||||||||| ||||| || | ||||
Sbjct 1032065 AGACGTAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGGACAAAGTTCTT 1032124
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| | ||| || |||||||| || || || || || || || || | ||||||
Sbjct 1032125 CCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGGGAATTCCCTCT 1032184
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668
||||| ||| || ||||| | || || || ||| ||||||| ||
Sbjct 1032185 TTGTCCTGGATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGACTTCCAATGTA 1032244
Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| ||||||||||| | ||||| || ||||| |||||
Sbjct 1032245 ATAGTTTTACCGGTAAGAGTTTTGACGAAAATTTGCAT 1032282
Score = 95.1 bits (104), Expect = 8e-15
Identities = 155/219 (71%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 34491 ACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTC 34550
|||||| |||||||| | ||| || ||||| || |||||||| || | |||||| |
Sbjct 1033038 ACGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCGACAATGTTCGGCC 1033097
Query 34551 GTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTT 34610
||||| ||||||||||| ||||| || || || || || || || || | || || ||
Sbjct 1033098 ATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTT 1033157
Query 34611 GTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCT--CTCCACTTCCACGGT 34667
|| ||| ||| | ||| || | || ||||| || | || ||||||| ||
Sbjct 1033158 ATCCTGGAT-TTTAGCTTTCACATTTTCGATAGTGTC--CGATGGTTCGACTTCCAAAGT 1033214
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| ||||| || || || ||||| || ||||| |||||
Sbjct 1033215 AATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
>seq391
Length=841353
Score = 123 bits (136), Expect = 2e-23
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | |||||||||| ||| | ||| |||||||||||||| ||||||||
Sbjct 250934 CCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGAC 250993
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| ||| ||| || |||||||| || || ||||| ||||| |||||||| || |||||
Sbjct 250994 AATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGG- 251052
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTC--TTCGCTCTCC 34656
| ||||| ||| ||| ||| ||||| ||| | ||| || || || |||||
Sbjct 251053 AATCCCTTCTTTATCCTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCT-- 251110
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| | | || |||| || || || ||||| |||||||| |||||
Sbjct 251111 ACTTCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
Score = 111 bits (122), Expect = 1e-19
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||||||||| | ||| ||||| | ||| || || || ||||| || || ||
Sbjct 730826 CCTCCTCTAAGACGAAGCACTAAATGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGAT 730885
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || | ||| || ||||| ||||| ||||| || | | || || ||||| ||
Sbjct 730886 AAAGTGCGGTTGTCGTCTAGTTGCTTACCAGCAAAAATAAGTCTTTGCTGATCCGGGGGA 730945
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTT-AACGATAAAATTGTGTC-TTCGCTCTCCA 34657
| ||| || |||||| ||| ||| ||||| | || ||| ||||| || | | ||||
Sbjct 730946 ATTCCTTCTTTGTCTTGGAT-TTTGGTTTTGATGGACTCAATAGTGTCATTTGGT-TCCA 731003
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| |||| ||| || | || || ||||| |||||||| |||||||||||
Sbjct 731004 CCTCCAGGGTAATGTTCTTCCCTGTTAATGTTTTCACGAAAATCTGCAT 731052
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||||||| || | ||| || || | ||| || || || || || || |||||
Sbjct 251162 CCACCTCTAAGTCGAAGCACTAAGTGTAATGTGGATTCTTTCTGGATATTGTAGTCTGAC 251221
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| ||||| | ||||| || ||||| ||||| ||||||||||| |||||
Sbjct 251222 AAAGTTCTAGAATCTTCTAACTGTTTTCCAGCAAAAATTAATCGCTGTTGGTCTGGCGGA 251281
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || || ||||| ||| ||| | || || | ||| ||||| | | || ||
Sbjct 251282 ATCCCTTCTTTGTC-CTGAATTTTCATCTTTACACTCTCAATAGTGTCGTTGGGTTCGAC 251340
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| | ||| |||| || ||||| || || |||||||| || ||
Sbjct 251341 TTCCAAAGATATATTTTTTCCTGTTAAGGTCTTTACAAAAATTTGTAT 251388
>seq768
Length=1243675
Score = 107 bits (118), Expect = 1e-18
Identities = 165/233 (71%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 34475 CGTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAAT 34534
|| ||||||| | || |||| |||||| |||| || ||||||||| ||||| || |
Sbjct 1130691 CGCCGCCGCCACGCAGCCGCAGCACCAAGTGGATCGTCGACTCCTTTTGGATGTTGTAGT 1130750
Query 34535 CTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCG 34594
| | || || ||| |||| || | || || |||||||| || | |||||| |||||||
Sbjct 1130751 CCGCGAGCGTGCGCCCGTCATCCAACTGCTTCCCGGCAAAAATCAGACGCTGCTGGTCCG 1130810
Query 34595 GCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTC 34653
|||| | ||||||||||| |||| || | ||| ||| | || ||||| |
Sbjct 1130811 GCGGAATGCCCTCCTTGTCCTGGATC-TTAGCTTTGACGCTCTCGATCGTGTCGTTTGGG 1130869
Query 34654 TCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| || | ||| || | || || || | ||| ||||| || || |||||
Sbjct 1130870 TCCACCTCAAGGGTGATGTTCTTCCCCGTGAGCGTCTTCACGAAGATTTGCAT 1130922
>seq558
Length=611125
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | || |||| ||||| || | |||| ||| || |||||||| || || |
Sbjct 303940 CCGCCGCGCAGTCGCAGTACCAAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGCG 303881
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || |||| || || || || || ||||| || || ||||| |||||||||||
Sbjct 303880 AGCGTGCGTCCGTCGTCGAGCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGGA 303821
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||| ||||| |||| || | ||| ||| | || ||||| | |||||
Sbjct 303820 ATGCCCTCTTTGTCCTGGATC-TTAGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCAC 303762
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | ||||| | || || || | || || ||||| ||||||||
Sbjct 303761 TTCGAGCGTTATGTTCTTGCCCGTGAGTGTCTTGACAAATATCTGCAT 303714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314724529116026
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