Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq1 179 3e-40
seq391 136 3e-27
seq768 109 5e-19
seq558 107 2e-18
>seq1
Length=3593316
Score = 179 bits (198), Expect = 3e-40
Identities = 178/228 (78%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || |||||||| ||||||| || | || || | ||||||||||| ||
Sbjct 1031826 ATGCAAATTTTCGTAAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAACCATCG 1031767
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | |||||| |||||| |||||||||||||| || ||||| |||||
Sbjct 1031766 GATACTATCGAAAATGTCAAAGCAAAAATCCAAGACAAAGAAGGTATTCCACCAGATCAG 1031707
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166
|||||||| || | ||||| |||||||||||||| || ||| | || |||||||| ||
Sbjct 1031706 CAGCGTTTGATCTTTGCCGGAAAACAATTGGAAGATGGT-CGAACATTGTCCGATTATAA 1031648
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||| ||||| || ||||| ||||||||||| ||||| | || |||||
Sbjct 1031647 CATCCAAAAAGAATCGACATTACATTTGGTATTGCGACTTCGTGGTGG 1031600
Score = 156 bits (172), Expect = 4e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||| || || |||||||| |||| || || | || ||| | ||||| ||||| ||
Sbjct 1033482 CATGCAAATCTTCGTAAAAACATTGACTGGTAAAACCATCACTTTGGAAGTCGAACCATC 1033423
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || || | || ||| ||||||||||| ||||||||||| ||||| |||||
Sbjct 1033422 GGACACCATCGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGCATTCCACCAGATCA 1033363
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|| || || || | || || |||||||||||||| || || | |||||||| ||
Sbjct 1033362 GCAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTGTCCGATTATAA 1033303
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||||| || || || |||||||| |||||| | || || || ||
Sbjct 1033302 TATTCAAAAGGAATCAACATTGCATTTGGTATTGCGTCTACGTGGCGGTAT 1033252
Score = 154 bits (170), Expect = 1e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || |||||||| ||||| || ||||||| | ||||| || || ||
Sbjct 1032282 ATGCAAATTTTCGTCAAAACTCTTACCGGTAAAACTATTACATTGGAAGTCGAGCCATCT 1032223
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| |||| || | || ||| ||||| || |||||||| || || || || |||||
Sbjct 1032222 GATACGATCGAAAATGTAAAAGCCAAAATCCAGGACAAAGAGGGAATTCCCCCAGATCAG 1032163
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| || || || | ||||| || ||||||||||| | || | ||||||||||||
Sbjct 1032162 CAACGATTGATCTTTGCCGGAAAGCAATTGGAAGATGGAAGAACTTTGTCCGATTACAAC 1032103
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||||| ||||| || ||||||||||| ||| | || ||||| ||
Sbjct 1032102 ATTCAAAAGGAATCGACATTGCATTTGGTTTTACGTCTCCGTGGTGGTAT 1032053
Score = 152 bits (168), Expect = 4e-32
Identities = 174/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| |||||| |||| || || | ||||| | ||||||||||| ||
Sbjct 1032738 ATGCAGATTTTTGTCAAAACTTTGACTGGTAAAACCATTACATTGGAAGTGGAACCCTCG 1032679
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | ||||| ||||| |||||||||||||| || ||||| || ||
Sbjct 1032678 GATACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGAATTCCACCAGACCAG 1032619
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166
|| ||||| || | ||| |||||||| | ||||| | ||| | || || ||||||||
Sbjct 1032618 CAACGTTTGATTTTCGCTGGCAAACAGCTTGAAGATGGC-CGAACATTGTCGGATTACAA 1032560
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||| || ||||| | ||| | || ||||| || || ||||| ||
Sbjct 1032559 CATTCAAAAAGAATCGACACTTCATCTCGTATTGCGATTACGTGGTGGTAT 1032509
Score = 149 bits (164), Expect = 5e-31
Identities = 173/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || ||||||||| |||| ||||| | |||||| | ||||| ||||| ||
Sbjct 1033253 ATGCAAATTTTCGTAAAAACTTTGACTGGCAAAACCATTACTTTGGAAGTCGAACCATCG 1033194
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| ||||| || || |||||||| || ||||| |||||
Sbjct 1033193 GACACTATCGAAAATGTGAAAGCTAAAATCCAGGATAAAGAAGGTATTCCACCAGATCAG 1033134
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166
|| || || || | || || |||||| | ||||| | ||| | || || ||||| ||
Sbjct 1033133 CAACGATTGATCTTTGCTGGTAAACAACTCGAAGATGGC-CGAACATTGTCGGATTATAA 1033075
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||| || || |||||||||||||| |||||||| || ||||| ||
Sbjct 1033074 TATACAAAAAGAATCCACCTTACATTTGGTATTGCGTTTACGTGGTGGAAT 1033024
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || || || || | || ||| | ||||| || || ||
Sbjct 1032054 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAAACGATCACTTTGGAAGTCGAGCCATCG 1031995
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || ||| || |||||||| || ||||| || ||||| |||||
Sbjct 1031994 GATACAATCGAAAATGTAAAAGCCAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAG 1031935
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | ||| || |||||||||||||| | ||| | |||||||||||
Sbjct 1031934 CAACGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGCCGTACCTTATCCGATTACAAT 1031875
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||| || || |||||||||||||| | ||| | || ||||| ||
Sbjct 1031874 ATTCAAAAAGAATCCACCTTACATTTGGTGCTTCGTCTCCGTGGTGGAAT 1031825
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || ||||| |||| || || | || || | || || ||||| ||
Sbjct 1032510 ATGCAAATTTTCGTGAAAACATTGACTGGTAAAACCATCACATTAGACGTTGAACCATCT 1032451
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || ||||||||| || ||||| || || ||||| || ||
Sbjct 1032450 GATACAATCGAAAATGTGAAGGCAAAAATTCAGGATAAAGAGGGAATTCCACCAGACCAG 1032391
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | ||||| |||||||| ||||| || || | || |||||||||
Sbjct 1032390 CAACGTTTGATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACATTATCGGATTACAAC 1032331
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||| ||||| || || |||||||| |||||| | || ||||| ||
Sbjct 1032330 ATCCAAAAAGAGTCAACTTTGCATTTGGTATTGCGTCTACGTGGTGGTAT 1032281
Score = 84.2 bits (92), Expect = 2e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 27089 AGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTC 27148
|||||| ||||| ||||| || ||||| || | || || ||||| |||||||| ||
Sbjct 1032865 AGGCATCCCACCAGATCAGCAACGTTTGATTTTTGCAGGTAAACAGTTGGAAGATGGTCG 1032806
Query 27149 GACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCG 27208
||| | || ||||||||||||||||| || || || | ||| | || || || || ||
Sbjct 1032805 CACCCTATCGGATTACAACATTCAAAAAGAATCTACACTTCATCTCGTATTACGATTACG 1032746
Query 27209 GGGTGGCAT 27217
||||| ||
Sbjct 1032745 TGGTGGTAT 1032737
>seq391
Length=841353
Score = 136 bits (150), Expect = 3e-27
Identities = 169/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || |||||||||||| |||| || || |||| |||| ||||| || || |
Sbjct 251160 ATGCAAATTTTTGTAAAAACTTTGACAGGAAAAAATATTTCTCTCGAAGTAGAGCCAAAC 251101
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| |||||||| || |||||||| || || || ||||||
Sbjct 251100 GATACCATTGAAAGCGTGAAAACGAAAATTCAGGATAAAGAAGGGATTCCGCCTGATCAA 251041
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCG---ACCGTTTCCGATTAC 27164
||||| ||||| | || || || ||| | || || |||| || | || ||||||
Sbjct 251040 CAGCGGTTAATTTTTGCTGGAAAGCAACTTGACGA---TTCGCGGACATTGTCAGATTAC 250984
Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||||||||||| || || || ||| |||| ||||| ||| | || ||
Sbjct 250983 AACATTCAAAAGGAATCAACTTTGCATCTGGTGTTGCGGTTGAGAGGAGG 250934
Score = 118 bits (130), Expect = 9e-22
Identities = 155/212 (73%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||||||||| | || || || |||| | ||||| || ||||| |
Sbjct 251616 ATGCAGATATTTGTAAAAACATTAACAGGTAAAAATATTTCGCTTGAGGTAGAACCCACT 251557
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || ||| |||||||| || || ||||| || || || ||||||
Sbjct 251556 GACACAATTGAAAATGTGAAAACGAAAATTCAGGATAAGGAAGGAATTCCGCCTGATCAA 251497
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTC--GACCGTT-TCCGATTAC 27164
|| || ||||| | || || |||||||| ||||| ||| || | || || || |||
Sbjct 251496 CAACGATTAATTTTTGCTGGAAAACAATTAGAAGA---TTCTAGAACTTTGTCAGACTAC 251440
Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGT 27196
|| || || || || ||||| ||||| || ||
Sbjct 251439 AATATCCAGAAAGAATCGACGTTACACTTAGT 251408
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/212 (71%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|| || || |||||||| || | || || || ||| || | ||||| ||||| |
Sbjct 251388 ATACAAATTTTTGTAAAGACCTTAACAGGAAAAAATATATCTTTGGAAGTCGAACCCAAC 251329
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || |||||||| ||||||||||| || || || || |||
Sbjct 251328 GACACTATTGAGAGTGTAAAGATGAAAATTCAGGACAAAGAAGGGATTCCGCCAGACCAA 251269
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTC--GACCGTT-TCCGATTAC 27164
||||| ||||| | || || ||||| || ||||| ||| || | || || || |||
Sbjct 251268 CAGCGATTAATTTTTGCTGGAAAACAGTTAGAAGA---TTCTAGAACTTTGTCAGACTAC 251212
Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGT 27196
|| || || || || || || ||||| || ||
Sbjct 251211 AATATCCAGAAAGAATCCACATTACACTTAGT 251180
Score = 86.0 bits (94), Expect = 5e-12
Identities = 163/238 (68%), Gaps = 3/238 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| | || || ||| ||||| || || ||||||||
Sbjct 731052 ATGCAGATTTTCGTGAAAACATTAACAGGGAAGAACATTACCCTGGAGGTGGAACCAAAT 730993
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | |||||| ||||| ||||| |||||||||||||| || || || |||||
Sbjct 730992 GACACTATTGAGTCCATCAAAACCAAAATCCAAGACAAAGAAGGAATTCCCCCGGATCAG 730933
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | || || || ||| | || |||| || | ||||| ||||||
Sbjct 730932 CAAAGACTTATTTTTGCTGGTAAGCAACTAGACGACAACCGCACTTTATCCGACTACAAC 730873
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT--TTTGCGTTTGCGG-GGTGGCATAACAA 27222
|| || || || || || | ||||| || || | || | || |||||| | ||||
Sbjct 730872 ATCCAGAAAGAATCCACAATTCATTTAGTGCTTCGTCTTAGAGGAGGTGGCGTTACAA 730815
>seq768
Length=1243675
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || || || ||| || || ||||| ||||| || |
Sbjct 1130922 ATGCAAATCTTCGTGAAGACGCTCACGGGGAAGAACATCACCCTTGAGGTGGACCCAAAC 1130863
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| |||| |||||| || || || ||||| || ||||| || || || ||
Sbjct 1130862 GACACGATCGAGAGCGTCAAAGCTAAGATCCAGGACAAGGAGGGCATTCCGCCGGACCAG 1130803
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||| || || ||||| ||| | || | | || ||||||
Sbjct 1130802 CAGCGTCTGATTTTTGCCGGGAAGCAGTTGGATGACGGGCGCACGCTCGCGGACTACAAC 1130743
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| |||||||||||||| | || ||||| |||| |||| || |||
Sbjct 1130742 ATCCAAAAGGAGTCGACGATCCACTTGGTGCTGCGGCTGCGTGGCGGC 1130695
>seq558
Length=611125
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| || || || || |||||| || || || |||||||| || |
Sbjct 303714 ATGCAGATATTTGTCAAGACACTCACGGGCAAGAACATAACGCTCGAAGTGGACCCAAAC 303773
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| |||| |||||| || || || |||||||| ||||| || || || ||
Sbjct 303774 GACACGATCGAGAGCGTCAAAGCTAAGATCCAGGACAAAGAGGGCATTCCGCCGGACCAG 303833
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | || || || || | || ||| | || | | || ||||||
Sbjct 303834 CAGCGCTTGATCTTTGCGGGGAAGCAGCTCGACGACGGACGCACGCTCGCGGACTACAAC 303893
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| || ||||| || | || ||||| |||| |||| || ||
Sbjct 303894 ATTCAGAAAGAGTCCACTATTCACTTGGTACTGCGACTGCGCGGCGG 303940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434911212973440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |