Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq458 120 3e-22
>seq458
Length=503182
Score = 120 bits (132), Expect = 3e-22
Identities = 266/393 (68%), Gaps = 21/393 (5%)
Strand=Plus/Plus
Query 118824 ATATTCTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGCCCCAGATCTCC--CTGG 118881
|||||| || |||||| |||||||||||||||||||||||| || ||||| || || |
Sbjct 280797 ATATTCGGCACCAAAATGTCTCCATTGAAAACCATAAACAGGACCTAGATCACCTTCTTG 280856
Query 118882 --GACCTA-AAATCTAAACCTACTTTTCTCTGAAATTCTTTTGACCCATTAGCATTCCAA 118938
|| | | ||| | || ||| || ||||||||||||| ||||| |||| ||||
Sbjct 280857 ACGATCAATAAAACCAAGACTA----TCAA-GAAATTCTTTTGAACCATTTGCATCCCAA 280911
Query 118939 ATAGCAACTCCtttttttGCCAGATCATTAGAGTTTGTAGAACCACTTAAAAACCAAAGA 118998
|| || ||||||| | | | || || | || ||||| ||| |||||| |
Sbjct 280912 ATTTTTACACCTTTTTCGGATAATTTTTTCGAATCAGTTGAACCTTTTATAAACCATAAT 280971
Query 118999 AGCTCCTCAACAACGCCTCTCCAAAAAACTGTTTTTGTTGTAAACAGTGGAAA---CTGA 119055
| || |||||||| || | |||||| || ||||||||| | || ||| || |||
Sbjct 280972 AATTCTTCAACAACACCACGCCAAAATACACGTTTTGTTGTGATCAATGGTAATGTTTGA 281031
Query 119056 CCTCTAAGTGAATATCTTGTTTGTGTTCCAAAAATAGACAGAGTCCCAACACCTGTTCTA 119115
| ||||||||| | ||||||| || || | || | || || ||| || | |
Sbjct 281032 TTACGAAGTGAATAACGATTTTGTGTACCGAACAATGATATTGTACCCGTACCGGTACGA 281091
Query 119116 TCATCTCTCTTGATACCCTGCTCTAAAATAGTTCTAATTAGATCAAGGTATTTTTTCTCA 119175
|||| | | | | ||| | || | | | | ||||||||| ||| |||| | ||
Sbjct 281092 TCATTTTTTTCGGCACCATTTTCAAGTACATGTTTAATTAGATTAAGATATTGATATTCG 281151
Query 119176 TCGTGATTTATAGCCATGTTTTATCtttttttt 119208
||||| || || |||||| ||||||||
Sbjct 281152 TCGTG------AGACA--TTTTATTTTTTTTTT 281176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414470122001608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |