Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq458 120 3e-22 >seq458 Length=503182 Score = 120 bits (132), Expect = 3e-22 Identities = 266/393 (68%), Gaps = 21/393 (5%) Strand=Plus/Plus Query 118824 ATATTCTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGCCCCAGATCTCC--CTGG 118881 |||||| || |||||| |||||||||||||||||||||||| || ||||| || || | Sbjct 280797 ATATTCGGCACCAAAATGTCTCCATTGAAAACCATAAACAGGACCTAGATCACCTTCTTG 280856 Query 118882 --GACCTA-AAATCTAAACCTACTTTTCTCTGAAATTCTTTTGACCCATTAGCATTCCAA 118938 || | | ||| | || ||| || ||||||||||||| ||||| |||| |||| Sbjct 280857 ACGATCAATAAAACCAAGACTA----TCAA-GAAATTCTTTTGAACCATTTGCATCCCAA 280911 Query 118939 ATAGCAACTCCtttttttGCCAGATCATTAGAGTTTGTAGAACCACTTAAAAACCAAAGA 118998 || || ||||||| | | | || || | || ||||| ||| |||||| | Sbjct 280912 ATTTTTACACCTTTTTCGGATAATTTTTTCGAATCAGTTGAACCTTTTATAAACCATAAT 280971 Query 118999 AGCTCCTCAACAACGCCTCTCCAAAAAACTGTTTTTGTTGTAAACAGTGGAAA---CTGA 119055 | || |||||||| || | |||||| || ||||||||| | || ||| || ||| Sbjct 280972 AATTCTTCAACAACACCACGCCAAAATACACGTTTTGTTGTGATCAATGGTAATGTTTGA 281031 Query 119056 CCTCTAAGTGAATATCTTGTTTGTGTTCCAAAAATAGACAGAGTCCCAACACCTGTTCTA 119115 | ||||||||| | ||||||| || || | || | || || ||| || | | Sbjct 281032 TTACGAAGTGAATAACGATTTTGTGTACCGAACAATGATATTGTACCCGTACCGGTACGA 281091 Query 119116 TCATCTCTCTTGATACCCTGCTCTAAAATAGTTCTAATTAGATCAAGGTATTTTTTCTCA 119175 |||| | | | | ||| | || | | | | ||||||||| ||| |||| | || Sbjct 281092 TCATTTTTTTCGGCACCATTTTCAAGTACATGTTTAATTAGATTAAGATATTGATATTCG 281151 Query 119176 TCGTGATTTATAGCCATGTTTTATCtttttttt 119208 ||||| || || |||||| |||||||| Sbjct 281152 TCGTG------AGACA--TTTTATTTTTTTTTT 281176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414470122001608