Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq558 149 1e-30
seq768 127 5e-24
seq1 114 3e-20
>seq558
Length=611125
Score = 149 bits (164), Expect = 1e-30
Identities = 168/224 (75%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|| |||| || || | ||||| |||||||||||| || ||||| || ||||| || ||
Sbjct 303934 CGCAGTCGCAGTACCAAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGCGAGCGTG 303875
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||| || || |||||||| || || ||||| | ||| || ||||| || |||| ||
Sbjct 303874 CGTCCGTCGTCGAGCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGGAATGCCC 303815
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCG 211070
|| |||||||||||||| ||| ||| | ||||| ||||| | || || || |||
Sbjct 303814 TCTTTGTCCTGGATCTTAGCTTTGACGCTCTCGATCGTGTC---GTTTGGGTCCACTTCG 303758
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||| |||||||| ||||| ||||| | ||||||
Sbjct 303757 AGCGTTATGTTCTTGCCCGTGAGTGTCTTGACAAATATCTGCAT 303714
>seq768
Length=1243675
Score = 127 bits (140), Expect = 5e-24
Identities = 149/200 (75%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| ||||| ||||||||||| || ||||| || || | || || |||| |||||| ||
Sbjct 1130726 GTCGACTCCTTTTGGATGTTGTAGTCCGCGAGCGTGCGCCCGTCATCCAACTGCTTCCCG 1130785
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| || || || || || ||||| || |||| || ||||||||||||||||| |||
Sbjct 1130786 GCAAAAATCAGACGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTAGCTTTG 1130845
Query 211038 ACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094
||| | ||||| ||||| | || || ||||| || ||||| |||| ||||||||
Sbjct 1130846 ACGCTCTCGATCGTGTC---GTTTGGGTCCACCTCAAGGGTGATGTTCTTCCCCGTGAGC 1130902
Query 211095 GTCTTTACAAACACCTGCAT 211114
||||| || || | |||||
Sbjct 1130903 GTCTTCACGAAGATTTGCAT 1130922
>seq1
Length=3593316
Score = 114 bits (126), Expect = 3e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976
||| ||||||||||||||||| ||||||| | || | |||||||| | || || ||
Sbjct 1032313 AGTTGACTCTTTTTGGATGTTGTAATCCGATAATGTACGACCATCTTCTAATTGTTTACC 1032372
Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036
|| ||||| | ||||| ||||| || |||| ||| || || ||||| || ||| ||
Sbjct 1032373 GGCAAAGATCAAACGTTGCTGGTCTGGTGGAATTCCCTCTTTATCCTGAATTTTTGCCTT 1032432
Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096
||| |||||||| || ||||| |||||| || | ||||| || || || || | ||
Sbjct 1032433 CACATTTTCGATTGTATCAGATGGTTCAACGTCTAATGTGATGGTTTTACCAGTCAATGT 1032492
Query 211097 CTTTACAAACACCTGCAT 211114
|| || || | |||||
Sbjct 1032493 TTTCACGAAAATTTGCAT 1032510
Score = 107 bits (118), Expect = 4e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| || || ||||| ||||| ||||| | | || ||||||||||||| ||||| ||
Sbjct 1032086 GTCGATTCCTTTTGAATGTTGTAATCGGACAAAGTTCTTCCATCTTCCAATTGCTTTCCG 1032145
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| ||||| | ||||| || || || |||| ||| || ||||||||||| || |||
Sbjct 1032146 GCAAAGATCAATCGTTGCTGATCTGGGGGAATTCCCTCTTTGTCCTGGATTTTGGCTTTT 1032205
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| |||||||| || ||||| || || || | || || || || || || |||||
Sbjct 1032206 ACATTTTCGATCGTATCAGATGGCTCGACTTCCAATGTAATAGTTTTACCGGTAAGAGTT 1032265
Query 211098 TTTACAAACACCTGCAT 211114
|| || || | |||||
Sbjct 1032266 TTGACGAAAATTTGCAT 1032282
Score = 105 bits (116), Expect = 2e-17
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| || |||||||||||||||||||| | | || | |||||||||| || || ||
Sbjct 1031630 GTCGATTCTTTTTGGATGTTATAATCGGACAATGTTCGACCATCTTCCAATTGTTTTCCG 1031689
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| ||||| | || || || || || |||| ||||| ||||| ||||| ||| |||
Sbjct 1031690 GCAAAGATCAAACGCTGCTGATCTGGTGGAATACCTTCTTTGTCTTGGATTTTTGCTTTG 1031749
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| |||||||| || || || ||| || || | ||||| || || || || | ||
Sbjct 1031750 ACATTTTCGATAGTATCCGATGGTTCCACTTCCAAGGTGATGGTTTTACCGGTCAATGTT 1031809
Query 211098 TTTACAAACACCTGCATT 211115
||||| || | ||||||
Sbjct 1031810 TTTACGAAAATTTGCATT 1031827
Score = 95.1 bits (104), Expect = 3e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| || || ||||| || |||||||| | | || | |||||||||| || || ||
Sbjct 1033285 GTTGATTCCTTTTGAATATTATAATCGGACAAAGTACGACCATCTTCCAATTGTTTACCA 1033344
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| ||||| | ||||| || || || |||| ||||| || || || || || |||
Sbjct 1033345 GCAAAGATCAATCGTTGCTGATCTGGTGGAATGCCTTCTTTATCTTGAATTTTGGCTTTA 1033404
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| |||||||||||||| || ||| || || | |||||| || || || || | ||
Sbjct 1033405 ACATTTTCGATGGTGTCCGATGGTTCGACTTCCAAAGTGATGGTTTTACCAGTCAATGTT 1033464
Query 211098 TTTACAAACACCTGCAT 211114
||||| || | |||||
Sbjct 1033465 TTTACGAAGATTTGCAT 1033481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159132366138530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |