Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1 161 2e-34
seq391 116 9e-21
seq658 104 6e-17
seq558 102 2e-16
seq724 91.5 4e-13
>seq1
Length=3593316
Score = 161 bits (178), Expect = 2e-34
Identities = 156/198 (79%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|||||||||||||| | ||| ||||| | ||| |||| |||||||| || || || |||
Sbjct 1033057 GTGGATTCTTTTTGTATATTATAATCCGACAATGTTCGGCCATCTTCGAGTTGTTTACCA 1033116
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TT 225635
|| ||||| | |||||| || || || ||||||||||| || || ||||| ||| || ||
Sbjct 1033117 GCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTTATCCTGGAT-TTTAGCTTT 1033175
Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695
|||| |||||| ||||| || | ||| || || || || || || ||||| ||||||||
Sbjct 1033176 CACATTTTCGATAGTGTCCGATGGTTCGACTTCCAAAGTAATGGTTTTGCCAGTCAAAGT 1033235
Query 225696 TTTTATGAACACTTGCAT 225713
||||| ||| | ||||||
Sbjct 1033236 TTTTACGAAAATTTGCAT 1033253
Score = 154 bits (170), Expect = 4e-32
Identities = 170/224 (76%), Gaps = 2/224 (1%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||| || || | || | || ||||||||||||| || ||||||| ||| ||
Sbjct 1031605 ACGAAGTCGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGACAATGT 1031664
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| |||||||| | || || || || ||||| | || || || || || ||||||||
Sbjct 1031665 TCGACCATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGAATACC 1031724
Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
||| ||||||||||| |||||| || ||| |||||| || || || | |||||| || |
Sbjct 1031725 TTCTTTGTCTTGGAT-TTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCCACTTCCA 1031783
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
| ||||| || || || ||||| ||||||| ||| | |||||||
Sbjct 1031784 AGGTGATGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCATT 1031827
Score = 152 bits (168), Expect = 1e-31
Identities = 158/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| | || || || || || || || ||||||||||| | |||||||| | ||| ||
Sbjct 1032517 ACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGACAATGT 1032576
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| |||||||| ||||| || |||||||| || | ||||| ||||| || ||||| ||
Sbjct 1032577 TCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGAATTCC 1032636
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||| ||||||||||| || ||| ||| ||| ||||| || |||| |||||| || ||
Sbjct 1032637 TTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCACTTCCAA 1032696
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
|| || || || || |||||||||||
Sbjct 1032697 TGTAATGGTTTTACCAGTCAAAGTTTT 1032723
Score = 143 bits (158), Expect = 6e-29
Identities = 152/198 (77%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| ||||| ||||| | ||| ||||||| |||||| | |||||||| | || || |||
Sbjct 1033285 GTTGATTCCTTTTGAATATTATAATCGGACAAAGTACGACCATCTTCCAATTGTTTACCA 1033344
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|| ||||| | |||||| || || || ||||| ||||| || ||||| || ||| ||||
Sbjct 1033345 GCAAAGATCAATCGTTGCTGATCTGGTGGAATGCCTTCTTTATCTTGAAT-TTTGGCTTT 1033403
Query 225637 A-CAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695
| || |||||||||||| || | ||| || || || ||||| || || || ||||| ||
Sbjct 1033404 AACATTTTCGATGGTGTCCGATGGTTCGACTTCCAAAGTGATGGTTTTACCAGTCAATGT 1033463
Query 225696 TTTTATGAACACTTGCAT 225713
||||| ||| | ||||||
Sbjct 1033464 TTTTACGAAGATTTGCAT 1033481
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|||||||||||||| | ||||||||||| || || | |||||||| | || || |||
Sbjct 1031858 GTGGATTCTTTTTGAATATTGTAATCGGATAAGGTACGGCCATCTTCCAATTGTTTACCA 1031917
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
||||| || | ||||| || || || |||||||||||||| ||||| ||||| ||
Sbjct 1031918 GCGAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCCTTATCTTGAATCTTGGCTTTT 1031977
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
||| |||||| || || || | || || || || |||||||| || || || | ||
Sbjct 1031978 ACATTTTCGATTGTATCCGATGGCTCGACTTCCAAAGTGATCGTTTTACCAGTTAGGGTC 1032037
Query 225697 TTTATGAACACTTGCAT 225713
|| | ||| | ||||||
Sbjct 1032038 TTGACGAAAATTTGCAT 1032054
>seq391
Length=841353
Score = 116 bits (128), Expect = 9e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554
||||| || || | ||| | ||||||||||| |||| |||||| || | |||||||||
Sbjct 251170 AAGTCGAAGCACTAAGTGTAATGTGGATTCTTTCTGGATATTGTAGTCTGACAAAGTTCT 251229
Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614
|||||||| ||| || ||||| || || | ||| |||||||| |||||||| |||||
Sbjct 251230 AGAATCTTCTAACTGTTTTCCAGCAAAAATTAATCGCTGTTGGTCTGGCGGAATCCCTTC 251289
Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674
||||| || || || ||| ||| || || ||||| || ||| || || || |
Sbjct 251290 TTTGTCCTGAATTTTCATCTTTACACTCTCAATAGTGTCGTTGGGTTCGACTTCCAAAGA 251349
Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| | || || || || || |||| || | ||| ||
Sbjct 251350 TATATTTTTTCCTGTTAAGGTCTTTACAAAAATTTGTAT 251388
Score = 98.7 bits (108), Expect = 2e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
||||||||||| |||| ||||| |||| ||||| | || ||||| ||||| |||
Sbjct 730856 GTGGATTCTTTCTGGATGTTGTAGTCGGATAAAGTGCGGTTGTCGTCTAGTTGCTTACCA 730915
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|| || ||||||| ||| || || || ||||| ||||| ||||||||||| || ||
Sbjct 730916 GCAAAAATAAGTCTTTGCTGATCCGGGGGAATTCCTTCTTTGTCTTGGATTTTGGTTTTG 730975
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
| | || || ||||| | |||||| || | || || |||| || || || |||
Sbjct 730976 ATGGACTCAATAGTGTCATTTGGTTCCACCTCCAGGGTAATGTTCTTCCCTGTTAATGTT 731035
Query 225697 TTTATGAACACTTGCAT 225713
|| | ||| | |||||
Sbjct 731036 TTCACGAAAATCTGCAT 731052
Score = 84.2 bits (92), Expect = 5e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564
|| || || | ||| ||||| ||||| | |||||||| | ||| || | | ||| ||
Sbjct 250952 ACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGACAATGTCCGCGAATCGTCA 251011
Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624
|| ||||| ||||| || || | || ||||| || |||||||| ||||| || || ||
Sbjct 251012 AGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGAATCCCTTCTTTATCCTGA 251071
Query 225625 ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG 225684
|| || ||||| ||| ||||| || | || || || | | || | ||
Sbjct 251072 ATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTACTTCGAGAGAAATATTTTTT 251131
Query 225685 CCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||||||||||| || | ||||||
Sbjct 251132 CCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
>seq658
Length=722326
Score = 104 bits (114), Expect = 6e-17
Identities = 93/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||| ||||| ||||| || || ||||| || |||||||| || || ||||||||
Sbjct 225321 GAAAATTTGTCCATCCGTAATTGAAATGACATTGGTCGGGATATAGGCTGATACATCACC 225380
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATTTTTATT 4586
||||||||||||| || || || ||||| | ||||||||| || || ||| |||
Sbjct 225381 AGCTTGTGTTTCGATGACTGGCAAAGCTGTCAATGATCCACCGCCGAATGTTTCATT 225437
>seq558
Length=611125
Score = 102 bits (112), Expect = 2e-16
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| |||| ||| || | ||| | |||||| ||||| || | ||||| || || | ||
Sbjct 303934 CGCAGTCGCAGTACCAAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGCGAGCGTG 303875
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || ||||||||||| || ||||| | || || ||||| |||||||| ||
Sbjct 303874 CGTCCGTCGTCGAGCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGGAATGCCC 303815
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCT-TCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|| ||||| |||||| || |||| ||| ||||| ||||| | ||||| || |
Sbjct 303814 TCTTTGTCCTGGATC-TTAGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCACTTCGAG 303756
Query 225672 CGTGATCGTCTTGCCCGT 225689
||| || ||||||||||
Sbjct 303755 CGTTATGTTCTTGCCCGT 303738
>seq724
Length=282867
Score = 91.5 bits (100), Expect = 4e-13
Identities = 80/98 (82%), Gaps = 4/98 (4%)
Strand=Plus/Plus
Query 371049 CTAGATTTTGTTTTCATGAAAAATTATCTATTGCAGGTAATTGTCGTATGTGTTTGGTGG 371108
|||||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||| |
Sbjct 63216 CTAGATTTTGTTATCATGAACGTTTATCAATTGCCGGTAATTGTCGTATGTGTTTGGTTG 63275
Query 371109 AGGATTTAAAACAAG--TTAAACCTTTAGCCTCCTGTG 371144
| | | ||| ||| |||||||| |||| || ||||
Sbjct 63276 A--AGTGGAAAAAAGTCTTAAACCTGTAGCATCATGTG 63311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192511000757468
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |