Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 4e-18
seq768 95.1 3e-14
seq558 84.2 5e-11
>seq1
Length=3593316
Score = 107 bits (118), Expect = 4e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|| |||||||| || || |||||||| ||||||||||| | || |||| ||||||||
Sbjct 1032530 ACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGACAATGTTCGGCCATCTTCA 1032589
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
|| ||| || ||||| || | | |||||||| | | |||||||| || |||||
Sbjct 1032590 AGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGAATTCCTTCTTTGTCTTGG 1032649
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
||||| |||||| | || | | | || || || ||||| | ||||| |||||
Sbjct 1032650 ATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCACTTCCAATGTAATGGTTTTA 1032709
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || | ||| || || || | ||||||
Sbjct 1032710 CCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
Score = 96.9 bits (106), Expect = 8e-15
Identities = 142/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA--GGCTTTTCC 151965
|| || || ||||| ||||||||||||| |||||||| |||||||| | ||||| |
Sbjct 1032086 GTCGATTCCTTTTGAATGTTGTAATCGGACAAAGTTCTTCCATCTTCCAATTGCTTT--C 1032143
Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025
|||| ||||| | | ||||| || | | ||||| || || || || ||||| ||
Sbjct 1032144 CGGCAAAGATCAATCGTTGCTGATCTGGGGGAATTCCCTCTTTGTCCTGGATTTTGGCTT 1032203
Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085
| ||| | || | | || || ||| ||||| | ||||||||||| || || ||||
Sbjct 1032204 TTACATTTTCGATCGTATCAGATGGCTCGACTTCCAATGTAATAGTTTTACCGGTAAGAG 1032263
Query 152086 TCTTCACGAAGACCTGCAT 152104
| || ||||| | |||||
Sbjct 1032264 TTTTGACGAAAATTTGCAT 1032282
Score = 93.3 bits (102), Expect = 1e-13
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| | ||| ||||||||||||||||||||||| | ||| || | ||||||||||
Sbjct 1032307 ATGCAAAGTTGACTCTTTTTGGATGTTGTAATCCGATAATGTACGACCATCTTCTAATTG 1032366
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| ||||| ||||| | | |||||||| | | ||||| || || || ||||||||
Sbjct 1032367 TTTACCGGCAAAGATCAAACGTTGCTGGTCTGGTGGAATTCCCTCTTTATCCTGAATTTT 1032426
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
| || ||| | || | | || || || || || | || || ||||| || ||
Sbjct 1032427 TGCCTTCACATTTTCGATTGTATCAGATGGTTCAACGTCTAATGTGATGGTTTTACCAGT 1032486
Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104
| || |||||||| | |||||
Sbjct 1032487 CAATGTTTTCACGAAAATTTGCAT 1032510
Score = 91.5 bits (100), Expect = 3e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
|| || |||||||||||||| ||||||| || |||| |||||||| | ||| |||
Sbjct 1031630 GTCGATTCTTTTTGGATGTTATAATCGGACAATGTTCGACCATCTTCCAATTGTTTTCCG 1031689
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027
|| ||||| | | |||||| || | | || ||||| || ||||| |||||| ||||
Sbjct 1031690 GCAAAGATCAAACGCTGCTGATCTGGTGGAATACCTTCTTTGTCTTGGATTTTTGCTTTG 1031749
Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087
||| | || | | || || || ||||| | || || ||||| || || | ||
Sbjct 1031750 ACATTTTCGATAGTATCCGATGGTTCCACTTCCAAGGTGATGGTTTTACCGGTCAATGTT 1031809
Query 152088 TTCACGAAGACCTGCATT 152105
|| ||||| | ||||||
Sbjct 1031810 TTTACGAAAATTTGCATT 1031827
>seq768
Length=1243675
Score = 95.1 bits (104), Expect = 3e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
|| ||||| |||||||||||||| || || | || | ||| || || | ||||||
Sbjct 1130726 GTCGACTCCTTTTGGATGTTGTAGTCCGCGAGCGTGCGCCCGTCATCCAACTGCTTCCCG 1130785
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027
|| || || || | ||||||||||| || || || ||||| || || || || ||||
Sbjct 1130786 GCAAAAATCAGACGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTAGCTTTG 1130845
Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087
|| |||| | |||| || || ||||| || || | || |||||||| |||
Sbjct 1130846 ACGCTCTCGATCGTGTCGTTTGGGTCCACCTCAAGGGTGATGTTCTTCCCCGTGAGCGTC 1130905
Query 152088 TTCACGAAGACCTGCAT 152104
|||||||||| |||||
Sbjct 1130906 TTCACGAAGATTTGCAT 1130922
>seq558
Length=611125
Score = 84.2 bits (92), Expect = 5e-11
Identities = 144/208 (69%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||| ||| |||||||| || |||||||| || || | || | || || || |
Sbjct 303920 CAAG-TGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGCGAGCGTGCGTCCGTCGTCGA 303862
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| ||||| || ||||| | | ||||||||||| || || || || || || || |
Sbjct 303861 GCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGGAATGCCCTCTTTGTCCTGGA 303802
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| |||| | |||| || ||||| || || || | ||||
Sbjct 303801 TCTTAGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCACTTCGAGCGTTATGTTCTTGC 303742
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||||| ||||| || || | ||||||
Sbjct 303741 CCGTGAGTGTCTTGACAAATATCTGCAT 303714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153801256439062
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |