Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1 439 3e-118 seq458 86.0 7e-12 >seq1 Length=3593316 Score = 439 bits (486), Expect = 3e-118 Identities = 635/886 (72%), Gaps = 14/886 (2%) Strand=Plus/Minus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 ||| ||||| ||||||||||||| |||||||| |||| |||||||||| ||||| || Sbjct 930130 CATGACACCACTTTTTTGATATTCGGCAACACGTTTTTCAAAAAAATTTGATTTACCTTC 930071 Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324 ||||||||| | ||||||||||||||||||||| | || ||||| || ||| Sbjct 930070 TAATGATATTTGTTCCATAAAATCAAATGGATTTGTTGTTTTATAATGTTTTTCACAATC 930011 Query 23325 TAATTCCTTTAAAAGCCTATCTGCTACAA-ATTCAATATATTGACACATCAAATCATAGT 23383 |||||| || | | ||| || |||| |||||||||| | |||| || | | | Sbjct 930010 TAATTCAACCAATAAACGATCGGC-ACAATATTCAATATAATCGGACATTAATTTAGCAT 929952 Query 23384 TTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAA-TAGTTTTTCAATGGAAACA 23442 | ||||| || | | |||||| | ||||| |||||| | || |||||| |||| Sbjct 929951 TCATACCGATCAATGATACTGGTAATGCATCGG-TAAGAAATTCTTGTTCAATATTAACA 929893 Query 23443 GCATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGAT-ATTTTAAATAC--TTA 23499 ||||| |||| |||| |||||| || | | |||| ||| |||| | | Sbjct 929892 GCATCAATAATAATTTCAACAATTCGTTGTGAT---GATGGACGATTACGAATATGATGA 929836 Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 ||||| | ||| |||||||||||||||| |||||||| | |||||||||||| ||| Sbjct 929835 AACAAAAGACAGGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTTGAA 929776 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || || | || ||||||| || |||||||| | |||||| ||||| |||||||| ||| Sbjct 929775 AAGGTAAGACCAGGCATTAGGCCACGTTTTTTTAGCCAAAAAATTGCTGCAAATGAACCG 929716 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 ||||| || || || |||||||| ||||| || | | |||| ||||||| | | Sbjct 929715 GAAAAAAATATTCCTTCAACAGCAGCAAATGCAATTAAACGTTCGGCAAATGTAACCGAA 929656 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACA--CTCAATTGTTT 23737 | ||| |||| | | | ||| ||||| || | |||||| | ||| | Sbjct 929655 TCATCTTGTGTCCAACGTATAGCCCATTTAGCTTTTTTCTCTACACAAGGTAGATTACGT 929596 Query 23738 CAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTA 23797 || || || || |||||| || ||| | | ||| | || ||| |||| ||| | || Sbjct 929595 --ATAGCATTGAATAGAAAATCTTGTTCATTACGATCCGATACATAGGTATTAATCAATA 929538 Query 23798 AACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAG 23857 | ||||||||| ||||||| |||||| |||||||| ||||| ||||||||||| | | Sbjct 929537 ATGAATACATTTCTGAATGAACATTTTCGATAGCAATTTGAAATCCATAAAAACAACGTG 929478 Query 23858 CTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCAT 23917 |||| | | ||| |||||| || ||| | || |||||||||||| ||||||||||||| Sbjct 929477 CTTCTGGTATTTGTACATCACGAATAAAACGTTCAGCTAAATTTTCATTAACAATACCAT 929418 Query 23918 CACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATT 23977 |||| |||||||| ||||| | |||| | || |||||| |||||| | ||||| Sbjct 929417 CACTTGCAGCAAAAAAAGCCAATACATGTGAAATGAAATGTTTTTCATTCGAATTTAATT 929358 Query 23978 TTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCA 24037 | ||||||| || ||| | || ||| ||||| |||||||||||||| ||| Sbjct 929357 TATTCCAATGTACAAGATCATGGCTTAGATCTACTTCTTCAACTGTCCAAAATGATGCTT 929298 Query 24038 AGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAA 24083 || || |||||| ||||||||||| || ||| |||||||| Sbjct 929297 CAGCTTTTTTGTACATTGTCCAAATATCATGATATTGAATTGGAAA 929252 >seq458 Length=503182 Score = 86.0 bits (94), Expect = 7e-12 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 139436 TACATACAAAATTTTGGATTGTTGATAATAAACATATATATATTGGAAGTGCTAACATGG 139495 |||||||||||||| ||||| ||| | ||| || | || | || |||||||| |||| Sbjct 379842 TACATACAAAATTTATTATTGTAGATCAAAAAGATTTTTACCTGGGTAGTGCTAATATGG 379783 Query 139496 ACTGGCGATCACTAACTCAAGTAAAAGAATTAGGTAT 139532 | ||||| ||| |||| || ||||||||||| ||||| Sbjct 379782 ATTGGCGTTCATTAACACATGTAAAAGAATTGGGTAT 379746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521479382410800