Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq1 439 3e-118
seq458 86.0 7e-12
>seq1
Length=3593316
Score = 439 bits (486), Expect = 3e-118
Identities = 635/886 (72%), Gaps = 14/886 (2%)
Strand=Plus/Minus
Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264
||| ||||| ||||||||||||| |||||||| |||| |||||||||| ||||| ||
Sbjct 930130 CATGACACCACTTTTTTGATATTCGGCAACACGTTTTTCAAAAAAATTTGATTTACCTTC 930071
Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324
||||||||| | ||||||||||||||||||||| | || ||||| || |||
Sbjct 930070 TAATGATATTTGTTCCATAAAATCAAATGGATTTGTTGTTTTATAATGTTTTTCACAATC 930011
Query 23325 TAATTCCTTTAAAAGCCTATCTGCTACAA-ATTCAATATATTGACACATCAAATCATAGT 23383
|||||| || | | ||| || |||| |||||||||| | |||| || | | |
Sbjct 930010 TAATTCAACCAATAAACGATCGGC-ACAATATTCAATATAATCGGACATTAATTTAGCAT 929952
Query 23384 TTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAA-TAGTTTTTCAATGGAAACA 23442
| ||||| || | | |||||| | ||||| |||||| | || |||||| ||||
Sbjct 929951 TCATACCGATCAATGATACTGGTAATGCATCGG-TAAGAAATTCTTGTTCAATATTAACA 929893
Query 23443 GCATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGAT-ATTTTAAATAC--TTA 23499
||||| |||| |||| |||||| || | | |||| ||| |||| | |
Sbjct 929892 GCATCAATAATAATTTCAACAATTCGTTGTGAT---GATGGACGATTACGAATATGATGA 929836
Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559
||||| | ||| |||||||||||||||| |||||||| | |||||||||||| |||
Sbjct 929835 AACAAAAGACAGGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTTGAA 929776
Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619
|| || | || ||||||| || |||||||| | |||||| ||||| |||||||| |||
Sbjct 929775 AAGGTAAGACCAGGCATTAGGCCACGTTTTTTTAGCCAAAAAATTGCTGCAAATGAACCG 929716
Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679
||||| || || || |||||||| ||||| || | | |||| ||||||| | |
Sbjct 929715 GAAAAAAATATTCCTTCAACAGCAGCAAATGCAATTAAACGTTCGGCAAATGTAACCGAA 929656
Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACA--CTCAATTGTTT 23737
| ||| |||| | | | ||| ||||| || | |||||| | ||| |
Sbjct 929655 TCATCTTGTGTCCAACGTATAGCCCATTTAGCTTTTTTCTCTACACAAGGTAGATTACGT 929596
Query 23738 CAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTA 23797
|| || || || |||||| || ||| | | ||| | || ||| |||| ||| | ||
Sbjct 929595 --ATAGCATTGAATAGAAAATCTTGTTCATTACGATCCGATACATAGGTATTAATCAATA 929538
Query 23798 AACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAG 23857
| ||||||||| ||||||| |||||| |||||||| ||||| ||||||||||| | |
Sbjct 929537 ATGAATACATTTCTGAATGAACATTTTCGATAGCAATTTGAAATCCATAAAAACAACGTG 929478
Query 23858 CTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCAT 23917
|||| | | ||| |||||| || ||| | || |||||||||||| |||||||||||||
Sbjct 929477 CTTCTGGTATTTGTACATCACGAATAAAACGTTCAGCTAAATTTTCATTAACAATACCAT 929418
Query 23918 CACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATT 23977
|||| |||||||| ||||| | |||| | || |||||| |||||| | |||||
Sbjct 929417 CACTTGCAGCAAAAAAAGCCAATACATGTGAAATGAAATGTTTTTCATTCGAATTTAATT 929358
Query 23978 TTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCA 24037
| ||||||| || ||| | || ||| ||||| |||||||||||||| |||
Sbjct 929357 TATTCCAATGTACAAGATCATGGCTTAGATCTACTTCTTCAACTGTCCAAAATGATGCTT 929298
Query 24038 AGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAA 24083
|| || |||||| ||||||||||| || ||| ||||||||
Sbjct 929297 CAGCTTTTTTGTACATTGTCCAAATATCATGATATTGAATTGGAAA 929252
>seq458
Length=503182
Score = 86.0 bits (94), Expect = 7e-12
Identities = 77/97 (79%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 139436 TACATACAAAATTTTGGATTGTTGATAATAAACATATATATATTGGAAGTGCTAACATGG 139495
|||||||||||||| ||||| ||| | ||| || | || | || |||||||| ||||
Sbjct 379842 TACATACAAAATTTATTATTGTAGATCAAAAAGATTTTTACCTGGGTAGTGCTAATATGG 379783
Query 139496 ACTGGCGATCACTAACTCAAGTAAAAGAATTAGGTAT 139532
| ||||| ||| |||| || ||||||||||| |||||
Sbjct 379782 ATTGGCGTTCATTAACACATGTAAAAGAATTGGGTAT 379746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521479382410800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |