Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq768 152 4e-32 seq558 125 5e-24 seq1 93.3 3e-14 >seq768 Length=1243675 Score = 152 bits (168), Expect = 4e-32 Identities = 174/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||||| ||| | ||| |||||||||||||||||| || ||| Sbjct 1130696 CCGCCACGCAGCCGCAGCACCAAGTGGATCGTCGACTCCTTTTGGATGTTGTAGTCCGCG 1130755 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || |||| |||| |||| ||||||||||||||| |||| ||||||||| || | || Sbjct 1130756 AGCGTGCGCCCGTCATCCAACTGCTTCCCGGCAAAAATCAGACGCTGCTGGTCCGGCGGA 1130815 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | || ||||| ||| ||||| |||| | | || | || |||||| | ||||| Sbjct 1130816 ATGCCCTCCTTGTCCTGGATCTT-AGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCAC 1130874 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 ||| | || || |||| |||||||| |||||||||||||||||||| || Sbjct 1130875 CTCAAGGGTGATGTTCTTCCCCGTGAGCGTCTTCACGAAGATTTGCATCAT 1130925 >seq558 Length=611125 Score = 125 bits (138), Expect = 5e-24 Identities = 169/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||||| || |||| ||||| ||| ||| || || |||||||| || ||| Sbjct 303940 CCGCCGCGCAGTCGCAGTACCAAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGCG 303881 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| ||||||| ||||||||||| ||||||||||| |||||||| || | || Sbjct 303880 AGCGTGCGTCCGTCGTCGAGCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGGA 303821 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | || || || ||| ||||| |||| | | || | || |||||| | ||||| Sbjct 303820 ATGCCCTCTTTGTCCTGGATCTT-AGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCAC 303762 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGT 44342 || | ||| || |||| |||||||| ||||| || || || ||||| |||| Sbjct 303761 TTCGAGCGTTATGTTCTTGCCCGTGAGTGTCTTGACAAATATCTGCATCATGT 303709 >seq1 Length=3593316 Score = 93.3 bits (102), Expect = 3e-14 Identities = 172/249 (69%), Gaps = 5/249 (2%) Strand=Plus/Plus Query 44090 TTACATGATTTTTATTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCC 44149 |||||| | |||| || ||| || | |||| ||| |||| || | || || Sbjct 1031582 TTACATCTTGTTTAGTT---TCCACCACGAAGTCGCAATACCAAATGTAATGTCGATTCT 1031638 Query 44150 TTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATC 44209 ||||||||||| ||||||| | | || | || |||| || || |||||||||||| Sbjct 1031639 TTTTGGATGTTATAATCGGACAATGTTCGACCATCTTCCAATTGTTTTCCGGCAAAGATC 1031698 Query 44210 AAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC-TTCAATGTTCC 44268 |||||||||||||||| || | |||||| || || || || ||| || | || | Sbjct 1031699 AAACGCTGCTGATCTGGTGGAATACCTTCTTTGTCTTGGAT-TTTTGCTTTGACATTTTC 1031757 Query 44269 TATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328 || || || | | |||||| |||| || || || || || || | || || ||||| Sbjct 1031758 GATAGTATCCGATGGTTCCACTTCCAAGGTGATGGTTTTACCGGTCAATGTTTTTACGAA 1031817 Query 44329 GATTTGCAT 44337 |||||||| Sbjct 1031818 AATTTGCAT 1031826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359984599879674