Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq768 152 4e-32
seq558 125 5e-24
seq1 93.3 3e-14
>seq768
Length=1243675
Score = 152 bits (168), Expect = 4e-32
Identities = 174/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || ||||| ||| | ||| |||||||||||||||||| || |||
Sbjct 1130696 CCGCCACGCAGCCGCAGCACCAAGTGGATCGTCGACTCCTTTTGGATGTTGTAGTCCGCG 1130755
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| |||| |||| |||| ||||||||||||||| |||| ||||||||| || | ||
Sbjct 1130756 AGCGTGCGCCCGTCATCCAACTGCTTCCCGGCAAAAATCAGACGCTGCTGGTCCGGCGGA 1130815
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289
| || ||||| ||| ||||| |||| | | || | || |||||| | |||||
Sbjct 1130816 ATGCCCTCCTTGTCCTGGATCTT-AGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCAC 1130874
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
||| | || || |||| |||||||| |||||||||||||||||||| ||
Sbjct 1130875 CTCAAGGGTGATGTTCTTCCCCGTGAGCGTCTTCACGAAGATTTGCATCAT 1130925
>seq558
Length=611125
Score = 125 bits (138), Expect = 5e-24
Identities = 169/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||||| || |||| ||||| ||| ||| || || |||||||| || |||
Sbjct 303940 CCGCCGCGCAGTCGCAGTACCAAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGCG 303881
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| ||||||| ||||||||||| ||||||||||| |||||||| || | ||
Sbjct 303880 AGCGTGCGTCCGTCGTCGAGCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGGA 303821
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289
| || || || ||| ||||| |||| | | || | || |||||| | |||||
Sbjct 303820 ATGCCCTCTTTGTCCTGGATCTT-AGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCAC 303762
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGT 44342
|| | ||| || |||| |||||||| ||||| || || || ||||| ||||
Sbjct 303761 TTCGAGCGTTATGTTCTTGCCCGTGAGTGTCTTGACAAATATCTGCATCATGT 303709
>seq1
Length=3593316
Score = 93.3 bits (102), Expect = 3e-14
Identities = 172/249 (69%), Gaps = 5/249 (2%)
Strand=Plus/Plus
Query 44090 TTACATGATTTTTATTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCC 44149
|||||| | |||| || ||| || | |||| ||| |||| || | || ||
Sbjct 1031582 TTACATCTTGTTTAGTT---TCCACCACGAAGTCGCAATACCAAATGTAATGTCGATTCT 1031638
Query 44150 TTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATC 44209
||||||||||| ||||||| | | || | || |||| || || ||||||||||||
Sbjct 1031639 TTTTGGATGTTATAATCGGACAATGTTCGACCATCTTCCAATTGTTTTCCGGCAAAGATC 1031698
Query 44210 AAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC-TTCAATGTTCC 44268
|||||||||||||||| || | |||||| || || || || ||| || | || |
Sbjct 1031699 AAACGCTGCTGATCTGGTGGAATACCTTCTTTGTCTTGGAT-TTTTGCTTTGACATTTTC 1031757
Query 44269 TATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328
|| || || | | |||||| |||| || || || || || || | || || |||||
Sbjct 1031758 GATAGTATCCGATGGTTCCACTTCCAAGGTGATGGTTTTACCGGTCAATGTTTTTACGAA 1031817
Query 44329 GATTTGCAT 44337
||||||||
Sbjct 1031818 AATTTGCAT 1031826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359984599879674
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |