Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq1 158 3e-33
seq768 131 4e-25
seq558 116 9e-21
seq391 114 3e-20
>seq1
Length=3593316
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || || ||||| |||||| | || |||||| || ||
Sbjct 1031823 CAAATTTTCGTAAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAACCATCGGAT 1031764
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || |||||| ||| || || ||||||||||| || || || || |||||
Sbjct 1031763 ACTATCGAAAATGTCAAAGCAAAAATCCAAGACAAAGAAGGTATTCCACCAGATCAGCAG 1031704
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| ||||||||||| | |||||||| | || | ||||||||||| ||
Sbjct 1031703 CGTTTGATCTTTGCCGGAAAACAATTGGAAGATGGTCGAACATTGTCCGATTATAACATC 1031644
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||||||||| ||| | ||| | || ||| ||||
Sbjct 1031643 CAAAAAGAATCGACATTACATTTGGTATTGCGACT 1031609
Score = 152 bits (168), Expect = 1e-31
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| |||||||| || || ||||| || || | || || || || ||
Sbjct 1032279 CAAATTTTCGTCAAAACTCTTACCGGTAAAACTATTACATTGGAAGTCGAGCCATCTGAT 1032220
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || ||| || || ||||||||||| ||||| || || || ||||||
Sbjct 1032219 ACGATCGAAAATGTAAAAGCCAAAATCCAGGACAAAGAGGGAATTCCCCCAGATCAGCAA 1032160
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | ||||| |||||||| || | ||||||||||| ||| | ||||||| ||| |
Sbjct 1032159 CGATTGATCTTTGCCGGAAAGCAATTGGAAGATGGAAGAACTTTGTCCGATTACAACATT 1032100
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132
||||| ||||| ||| ||||| | |||||
Sbjct 1032099 CAAAAGGAATCGACATTGCATTTGGTTTT 1032071
Score = 145 bits (160), Expect = 2e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || |||||| | || || ||||| || || | || |||||| ||| ||
Sbjct 1032735 CAGATTTTTGTCAAAACTTTGACTGGTAAAACCATTACATTGGAAGTGGAACCCTCGGAT 1032676
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || ||||| || || || |||||||||||||| || || |||||||||
Sbjct 1032675 ACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGAATTCCACCAGACCAGCAA 1032616
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || |||||||| |||||||| | || | | ||||| ||| |
Sbjct 1032615 CGTTTGATTTTCGCTGGCAAACAGCTTGAAGATGGCCGAACATTGTCGGATTACAACATT 1032556
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136
||||||||||| ||||| ||||| || ||| ||
Sbjct 1032555 CAAAAAGAATCGACACTTCATCTCGTATTGCGA 1032523
Score = 140 bits (154), Expect = 8e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||||||||| | || || ||||| ||||| | || || ||| || ||
Sbjct 1032507 CAAATTTTCGTGAAAACATTGACTGGTAAAACCATCACATTAGACGTTGAACCATCTGAT 1032448
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || ||| |||||||| ||||| ||||| || || |||||||||
Sbjct 1032447 ACAATCGAAAATGTGAAGGCAAAAATTCAGGATAAAGAGGGAATTCCACCAGACCAGCAA 1032388
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| ||||| ||||| | |||||||| | || | | ||||| ||| ||
Sbjct 1032387 CGTTTGATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACATTATCGGATTACAACATC 1032328
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|||||||| ||||| ||||| | || |||
Sbjct 1032327 CAAAAAGAGTCAACTTTGCATTTGGTATTG 1032298
Score = 140 bits (154), Expect = 8e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| ||||| | || || ||||| ||||| | || || ||| || |||
Sbjct 1033478 CAAATCTTCGTAAAAACATTGACTGGTAAAACCATCACTTTGGAAGTCGAACCATCGGAC 1033419
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || ||| || ||||| || |||||||| || || || || ||||||
Sbjct 1033418 ACCATCGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGCATTCCACCAGATCAGCAA 1033359
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | ||||| || || ||||| | |||||||| | ||| | |||||||||| |
Sbjct 1033358 CGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTGTCCGATTATAATATT 1033299
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
||||| ||||||||| ||||| | || |||
Sbjct 1033298 CAAAAGGAATCAACATTGCATTTGGTATTG 1033269
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| |||||| | || || ||||| || || | || || ||| || |||
Sbjct 1033250 CAAATTTTCGTAAAAACTTTGACTGGCAAAACCATTACTTTGGAAGTCGAACCATCGGAC 1033191
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || ||| || || ||||| |||||||| || || || || ||||||
Sbjct 1033190 ACTATCGAAAATGTGAAAGCTAAAATCCAGGATAAAGAAGGTATTCCACCAGATCAGCAA 1033131
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | ||||| || || ||||| ||||||||||| | || | | |||||||| |
Sbjct 1033130 CGATTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGAACATTGTCGGATTATAATATA 1033071
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
||||||||||| || | ||| | || |||
Sbjct 1033070 CAAAAAGAATCCACCTTACATTTGGTATTG 1033041
Score = 111 bits (122), Expect = 4e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || ||||||||||| | || || || || ||
Sbjct 1032051 CAAATTTTCGTCAAGACCCTAACTGGTAAAACGATCACTTTGGAAGTCGAGCCATCGGAT 1031992
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || ||| |||||||| || || ||||| || || || || ||||||
Sbjct 1031991 ACAATCGAAAATGTAAAAGCCAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAGCAA 1031932
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || ||||| | |||||||| | || | ||||||| || |
Sbjct 1031931 CGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGCCGTACCTTATCCGATTACAATATT 1031872
Query 178104 CAAAAAGAATCAAC 178117
||||||||||| ||
Sbjct 1031871 CAAAAAGAATCCAC 1031858
>seq768
Length=1243675
Score = 131 bits (144), Expect = 4e-25
Identities = 152/204 (75%), Gaps = 6/204 (3%)
Strand=Plus/Minus
Query 177917 AATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAG 177976
|||| | ||||| |||||||| || ||||| || || | |||||||| ||||||||
Sbjct 1130926 AATGATGCAAATCTTCGTGAAGACGCTCACGGGGAAGAACATCACCCTTGAGGTGGA--- 1130870
Query 177977 CTCA---GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCC 178033
| || ||||| ||||||| ||||||| ||||| |||||||| || || || || ||
Sbjct 1130869 CCCAAACGACACGATCGAGAGCGTCAAAGCTAAGATCCAGGACAAGGAGGGCATTCCGCC 1130810
Query 178034 GGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGA 178093
||||||||| || || || || ||||| || ||| | || || || | || || || ||
Sbjct 1130809 GGACCAGCAGCGTCTGATTTTTGCCGGGAAGCAGTTGGATGACGGGCGCACGCTCGCGGA 1130750
Query 178094 TTATAACGTCCAAAAAGAATCAAC 178117
|| ||| ||||||| || || ||
Sbjct 1130749 CTACAACATCCAAAAGGAGTCGAC 1130726
>seq558
Length=611125
Score = 116 bits (128), Expect = 9e-21
Identities = 150/206 (73%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
|| ||| | || || || || || || ||||| || || | || || ||||| |||||
Sbjct 303708 AACATGATGCAGATATTTGTCAAGACACTCACGGGCAAGAACATAACGCTCGAAGTGGA- 303766
Query 177975 AGCTCA---GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCT 178031
| || ||||| ||||||| ||||||| ||||| ||||||||||| || || ||
Sbjct 303767 --CCCAAACGACACGATCGAGAGCGTCAAAGCTAAGATCCAGGACAAAGAGGGCATTCCG 303824
Query 178032 CCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC 178091
||||||||||| || | ||||| || || || |||||||| || ||| | || || ||
Sbjct 303825 CCGGACCAGCAGCGCTTGATCTTTGCGGGGAAGCAGCTCGACGACGGACGCACGCTCGCG 303884
Query 178092 GATTATAACGTCCAAAAAGAATCAAC 178117
|| || ||| | || ||||| || ||
Sbjct 303885 GACTACAACATTCAGAAAGAGTCCAC 303910
>seq391
Length=841353
Score = 114 bits (126), Expect = 3e-20
Identities = 146/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| | ||||| || | || ||||| ||||||||| |||
Sbjct 731049 CAGATTTTCGTGAAAACATTAACAGGGAAGAACATTACCCTGGAGGTGGAACCAAATGAC 730990
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || ||| | ||||| || || || |||||||||||||| || ||||| ||||||
Sbjct 730989 ACTATTGAGTCCATCAAAACCAAAATCCAAGACAAAGAAGGAATTCCCCCGGATCAGCAA 730930
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||| || || || || || || || || | ||| | |||| || ||| ||
Sbjct 730929 AGACTTATTTTTGCTGGTAAGCAACTAGACGACAACCGCACTTTATCCGACTACAACATC 730870
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| |||||||| ||| | |||
Sbjct 730869 CAGAAAGAATCCACAATTCAT 730849
Score = 95.1 bits (104), Expect = 3e-14
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || || || | |||||||||| || | | || || ||| | |||
Sbjct 251385 CAAATTTTTGTAAAGACCTTAACAGGAAAAAATATATCTTTGGAAGTCGAACCCAACGAC 251326
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || |||| || || || ||||||||||||||||| || || || ||||| ||
Sbjct 251325 ACTATTGAGAGTGTAAAGATGAAAATTCAGGACAAAGAAGGGATTCCGCCAGACCAACAG 251266
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | || || || ||||||||| | |||||| || ||| | | || || || ||
Sbjct 251265 CGATTAATTTTTGCTGGAAAACAGTTAGAAGATTCTAGAACTTTGTCAGACTACAATATC 251206
Query 178104 CAAAAAGAATCAACA 178118
|| |||||||| |||
Sbjct 251205 CAGAAAGAATCCACA 251191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203710811050468
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |