Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq558 134 1e-26
seq391 87.8 2e-12
>seq558
Length=611125
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|||||||| || || | |||| || | ||| ||| ||||||||||| ||||| | |
Sbjct 303940 CCGCCGCGCAGTCGCAGTACCAAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGCG 303881
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||||||||||||||| || || || |||| |||||| ||||||| |||
Sbjct 303880 AGCGTGCGTCCGTCGTCGAGCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGGA 303821
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCAC 41814
| || ||| |||||| || | || |||| ||| | | |||||| | | |||||
Sbjct 303820 ATGCCCTCTTTGTCC-TGGATCTTAGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCAC 303762
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | |||||| | || ||||| || ||||| || || ||||||||
Sbjct 303761 TTCGAGCGTTATGTTCTTGCCCGTGAGTGTCTTGACAAATATCTGCAT 303714
>seq391
Length=841353
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | ||| | ||| | ||| || ||||| ||||| |||||||| | |||||
Sbjct 730835 AGACGAAGCACTAAATGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGATAAAGTGCGG 730894
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| |||||| || ||||| || || || || || | || || |||| ||||| | ||
Sbjct 730895 TTGTCGTCTAGTTGCTTACCAGCAAAAATAAGTCTTTGCTGATCCGGGGGAATTCCTTCT 730954
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824
||||| |||||| || | ||| | |||||| | | |||||||||| ||
Sbjct 730955 TTGTCTTGGATTTTGGTTTTGATGGACTCAATAGTGTCATTTGGTTCCACCTCCAGGGTA 731014
Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || || || | || || ||||||||||||||
Sbjct 731015 ATGTTCTTCCCTGTTAATGTTTTCACGAAAATCTGCAT 731052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462296360426400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |