Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_000866.4 Length=168903 Score E Sequences producing significant alignments: (Bits) Value seq3532 192 6e-44 seq3176 147 2e-30 >seq3532 Length=11862 Score = 192 bits (212), Expect = 6e-44 Identities = 153/184 (83%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 63556 ATTACAAACTTTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAG 63615 |||||| |||||||| || ||||| | || ||||| || |||||||| || |||| | Sbjct 11149 ATTACAGGCTTTCAGTGAAAGTACGCGTAATCACGTCACGTTGCTGTTCTGGGGTCAATG 11208 Query 63616 AGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGAT 63675 |||| || || ||||||||||| || ||||||||||||| |||||| ||||||||||| | Sbjct 11209 AGTTGAAACGCACTGCATAACCAGAAACACGGATGGTCAACTGCGGGTATTTTTCCGGGT 11268 Query 63676 GCTTAACTGCATCTTCCAGAGTTTCATGACGCAGAACGTTAACGTTCAGGTGTTGACCAC 63735 | || || ||||||||||| |||||| | ||||||||||| |||||||||||||| || | Sbjct 11269 GTTTTACCGCATCTTCCAGCGTTTCACGGCGCAGAACGTTCACGTTCAGGTGTTGCCCCC 11328 Query 63736 CTTC 63739 |||| Sbjct 11329 CTTC 11332 >seq3176 Length=18404 Score = 147 bits (162), Expect = 2e-30 Identities = 137/174 (79%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 63569 AGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAAC 63628 ||| || ||||| | |||||||| |||||||||| ||||| ||||| ||||| || Sbjct 6327 AGTGAAAGTACGGGTAATAACGTCTTGCTGCTGTTCTTTGGTCAGCGAGTTGAAGCGCAC 6386 Query 63629 TGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATC 63688 |||||||| || ||||||||||||| |||||||||||||||||| || | | ||||| Sbjct 6387 GGCATAACCAGAAACACGGATGGTCAACTGCGGATATTTTTCCGGGTGTTCCATGGCATC 6446 Query 63689 TTCCAGAGTTTCATGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCAAT 63742 ||| ||||| | || ||||| ||||||||||||||||||||||| || Sbjct 6447 CAACAGCATTTCACGGTTCATCACGTTCACGTTCAGGTGTTGACCACCTTCGAT 6500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540334798064640