Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq320 98.7 1e-15 >seq320 Length=265502 Score = 98.7 bits (108), Expect = 1e-15 Identities = 131/180 (73%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTG--TACATTTCTGAGTGTATGTTCTCTATGGCTATCT 16529 ||||| || ||||||| ||| | ||||| || || ||||| ||||| || || | | Sbjct 14929 ATATAAGTTTCAATCA--AAAGGGAATACATCTCAGAATGTATATTCTCCATAGCAACTT 14872 Query 16530 GAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCA 16589 | ||||||||||||||||| ||||| | | ||| || ||| |||| |||| | | Sbjct 14871 GGAATCCATAGAAGCATCGTGCCTCAGTGACTTGCACCTCCTGACTGAATCTTTCCACAA 14812 Query 16590 GGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAAT 16649 | ||||||||||| || || || ||||||||||| || | || ||| |||||||| Sbjct 14811 GATTCTCATTCACAATTCCATCTGAGGCAGCAAAAAAAGCTAGTACGTGGGAAATGAAAT 14752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511389033845760