Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq88 136 5e-27 >seq88 Length=1565181 Score = 136 bits (150), Expect = 5e-27 Identities = 137/178 (77%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 145761 GTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCC 145820 ||| || | ||| || |||| ||| |||||| ||| ||||||||||||||||| || || Sbjct 328619 GTGTGCCAGCATATACGTCAACAGTGAGTAGGAGGCGATGTTGAAGGGCACCCCGAGGCC 328678 Query 145821 CATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTG 145880 |||||| | || |||||||| || ||||||||||| ||| | || ||| ||||||| Sbjct 328679 CATGTCTGCGCTTCGTTGGTACAGGTGACAGGAGAGCTCTCCGTCAGCAACGAAGAACTG 328738 Query 145881 GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCG 145938 | ||| ||||||||| || || ||||| ||| | ||| || |||||||||||| Sbjct 328739 GACGAGGCAGTGGCAGGGTGGAAGAGCCATTTTGGGAATGTCTGCTGGGTTCCAGGCG 328796 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| ||| || |||| |||||||| ||||| |||| ||||| || || || ||| Sbjct 328992 GTACTTGGCACCAGAGTGTCTCCACTGAAACCCATAGATTGGCCCTAGATCACCCTCCTC 329051 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 | || | | ||| | | | | || || || | ||||||||||||||| || Sbjct 329052 ACGGTCCTTGAAGCCGTAAGCATCCAAGTATTCACGTGAGCTGTTGGCGTCCCAGATTTT 329111 Query 146160 GACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTC 146219 || || | | || | || | || || ||||| || |||||||||||||| || || Sbjct 329112 CACTCCTCGCTTTGATAATTCGTGGGCGTTTGTGGATCCACTGATGAACCAGAGGAGTTC 329171 Query 146220 TTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 ||| | || ||| ||||||||||| || ||||| || || ||||| Sbjct 329172 TTCCACTACTCCCTTCCAGAAGACCGATTTCGTGGTGAGAAGTGGGAA 329219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590047532190720