Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_001697.1 Length=32355 Score E Sequences producing significant alignments: (Bits) Value seq1883 113 9e-21 seq3174 109 1e-19 >seq1883 Length=9953 Score = 113 bits (124), Expect = 9e-21 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 356 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 415 |||||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||| Sbjct 9204 TGGTGGGTCGTGCAGGATTCGAACCTGCGACCAATTGATTAAAAGTCAACTGCTCTACCG 9145 Query 416 ACTGAGCTAACGACCCA 432 ||||||||||||||||| Sbjct 9144 ACTGAGCTAACGACCCA 9128 >seq3174 Length=2500 Score = 109 bits (120), Expect = 1e-19 Identities = 75/85 (88%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 349 ATATTATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGC 408 ||||| ||||||||||||| ||| ||||||||| ||||||| |||||| |||| |||| Sbjct 647 ATATTGTTGGTGGGTCGTGCAGGGTTCGAACCTGCGACCAATTGATTAAGAGTCAACTGC 706 Query 409 TCTACCGACTGAGCTAACGACCCAA 433 |||||| |||||||||||||||||| Sbjct 707 TCTACCAACTGAGCTAACGACCCAA 731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103409527113472