Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq676 100 2e-16 seq14 98.7 8e-16 seq10 93.3 4e-14 >seq676 Length=265522 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| || | ||| || ||||| || ||||| || || | || || | |||| Sbjct 178343 AGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCGTCT 178402 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||| ||||| || || | || |||||||||||||| ||| | || ||||| || Sbjct 178403 TCCAATTGTTTTCCAGCGAAGATCAGTCTCTGCTGGTCTGGGGGAATTCCCTCCTTATCC 178462 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||||| ||||| | ||| |||||| || ||| || | ||| |||||| Sbjct 178463 TGGATCTTTGCCTTCACGTTCTCGATGGTATCAGAGGCCTCGACCTCGAGGGTGATGGTC 178522 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 ||||| || | |||||| || ||||| |||||||| Sbjct 178523 TTGCCCGTCAGCGTTTTCACGAATATCTGCATTTT 178557 >seq14 Length=2234412 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 20961 CTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCG 21020 ||||| |||| || | || || ||||| |||||||| || || | |||||| | | Sbjct 1933612 CTGAGTACCAAGTGAAGTGTCGATTCCTTCTGAATGTTGTAATCAGACAGGGTGCGTCCA 1933553 Query 21021 TCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTG 21080 ||||| |||||||| || || |||| || ||||||||||| ||| | ||| |||||| Sbjct 1933552 TCCTCGAGCTGTTTACCAGCGAAAATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTG 1933493 Query 21081 TCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATG 21140 || || || ||| || | ||| || ||| | |||| || | ||| ||| Sbjct 1933492 TCCTGAATTTTGGCTTTGACATTCTCGATTGTGTCAGAAGCCTCCACCTCGAGGGTGATG 1933433 Query 21141 GTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 ||||| || |||| ||||| || || || ||||| ||| Sbjct 1933432 GTCTTCCCAGTTAGGGTTTTTACGAAGATCTGCATGTTG 1933394 >seq10 Length=2352850 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | || |||| |||| |||||| |||||||||||||| ||||| | Sbjct 819891 TTCCACCACGAAGACGTAGGACCAAGTGCAGAGTGGATTCCTTTTGAATGTTGTAGTCTG 819832 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 |||||| || | || |||| ||| || || || | || || | |||||||| | Sbjct 819831 AGAGGGTTCGGCCATCTTCCAACTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAG 819772 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || || ||||| |||||| ||| || | | | || ||| || ||| Sbjct 819771 GGATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGA 819712 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| |||||||| || || ||||| || || || || ||||| Sbjct 819711 CCTCCAGGGTGATGGTCTTTCCAGTCAACGTCTTCACGAAGATCTGCAT 819663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422238779545088