Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq676 105 5e-18 seq10 87.8 1e-12 >seq676 Length=265522 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090 ||||||||| |||||| | ||||| |||||||||| ||||| ||| ||| || | Sbjct 178558 AAAAATGCAGATATTCGTGAAAACGCTGACGGGCAAGACCATCACCCTCGAGGTCGAGGC 178499 Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150 | | || || | | | | ||| ||| || ||||| || || | ||| ||| Sbjct 178498 CTCTGATACCATCGAGAACGTGAAGGCAAAGATCCAGGATAAGGAGGGAATTCCCCCAGA 178439 Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTA 25210 || || ||||| ||||| || || |||||||||||||| ||| | | ||||| Sbjct 178438 CCAGCAGAGACTGATCTTCGCTGGAAAACAATTGGAAGACGGTCGCACTCTTTCTGATTA 178379 Query 25211 CAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||| || || |||||||||||||||||| |||| | ||| | || ||||| Sbjct 178378 CAACATCCAGAAGGAATCTACTCTTCACTTGGTCCTTCGACTTCGTGGAGG 178328 >seq10 Length=2352850 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 |||||| || || |||| || |||| ||||| ||||| || |||| || || | Sbjct 820574 AATGCAGATTTTTGTCAAGACTCTGACTGGCAAGACCATCACACTCGAAGTAGAGGCCTC 820633 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | | ||||| || || |||||||| || | || ||| || Sbjct 820634 TGACACAATTGAAAACGTCAAGGCGAAGATCCAGGATAAAGAGGGAATTCCTCCAGACCA 820693 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 |||| | || ||||| || || ||||||||||||||| || ||| | | || ||||| Sbjct 820694 ACAACGTCTCATCTTCGCTGGTAAACAATTGGAAGATGGCAGGACTCTCTCAGACTACAA 820753 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || |||||||| ||||| ||| |||| |||| | ||||| || Sbjct 820754 CATCCAGAAGGAATCCACTCTGCACTTGGTCCTACGTCTTCGAGGTGG 820801 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 |||||| || || | || |||||||| ||||||||||| ||| ||| ||| | | Sbjct 819890 AATGCAGATTTTTGTTAAGACATTGACTGGCAAAACCATCACCCTGGAAGTCGAAGCATC 819949 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | || |||||| |||||||||||| | || |||||| Sbjct 819950 TGACACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATCCCACCAGATCA 820009 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||| | | ||||| || || ||||||||||| || | |||| | | || ||||| Sbjct 820010 ACAGCGTTTGATCTTCGCTGGTAAACAATTGGAGGACGGAAGAACTCTTTCAGACTACAA 820069 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| || || || || || | || | || | |||||||| Sbjct 820070 CATTCAAAAAGAGTCCACCCTCCATCTCGTTCTTCGTCTTCGAGGAGG 820117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410776933866752