Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq97 86.0 1e-11 >seq97 Length=1294141 Score = 86.0 bits (94), Expect = 1e-11 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 189452 TGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATG 189511 ||||| || | || | ||| ||||||| || |||||||| ||| | || | | ||| Sbjct 592694 TGGAATGCAGCCCAGAATCAGCTGGTGAGGGATGGAAAAATTCATGGATTCATGAGGATG 592635 Query 189512 TATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTATAGT 189571 |||||||| ||||| || || ||||||| | ||| || || || ||| | | Sbjct 592634 TATTGGGCGAAGAAAATTCTGGAATGGAGTCCAACGCCAGAGGATGCTCTCGCCTGGTCA 592575 Query 189572 ATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGT 189628 ||||| | ||| |||||||| | || |||| |||||||||||| ||||| ||| Sbjct 592574 ATCTACCTCAACGACAAGTACAGCATGGATGGCAGGGATCCTAACGGTTACGTTGGT 592518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923151009438720