Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq14 125 8e-24 seq676 114 1e-20 seq328 105 8e-18 seq38 105 8e-18 seq88 98.7 1e-15 seq98 95.1 1e-14 seq10 89.7 6e-13 seq103 82.4 9e-11 >seq14 Length=2234412 Score = 125 bits (138), Expect = 8e-24 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| ||||| ||||| |||||||||| ||| || || | || || Sbjct 1933606 ACCAAGTGAAGTGTCGATTCCTTCTGAATGTTGTAATCAGACAGGGTGCGTCCATCCTCG 1933547 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 ||||| ||||||||||| || || | ||||||||| | || | || |||||||||| || Sbjct 1933546 AGCTGTTTACCAGCGAAAATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC-TG 1933488 Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 | |||| | ||||| || | | ||||| | ||||| |||| |||||||| || Sbjct 1933487 AATTTTGGCTTTGACATTCTCGATTGTGTCAGAAGCCTCCACCTCGAGGGTGATGGTCTT 1933428 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 || ||||| || ||||| ||||| ||||| || Sbjct 1933427 CCCAGTTAGGGTTTTTACGAAGATCTGCATGTT 1933395 >seq676 Length=265522 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||| |||||||||| ||||| || | || || |||||||| |||||||| Sbjct 177452 TCCTTCTGAATGTTGTAATCAGAAAGAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAAG 177511 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || |||| ||||||||||| || | | |||||| ||| |||||| || | || Sbjct 177512 ATCAGTCTCTGCTGGTCGGGGGGAATTCCCTCCTTATCCTGGATTTTAGCCTTCACATTC 177571 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||| | || || |||| |||||||| || || || || ||||| || Sbjct 177572 TCGATGGTGTCGGAGGCCTCGACCTCGAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACG 177631 Query 43173 AAGATTTGCAT 43183 ||||||||||| Sbjct 177632 AAGATTTGCAT 177642 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||| |||||||||| ||||| || | || || |||||||| |||||||| Sbjct 177908 TCCTTCTGAATGTTGTAATCAGAAAGAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAAG 177967 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | || ||||||||| | || | | |||||| ||| ||| || || | || Sbjct 177968 ATCAATCTCTGCTGGTCTGGGGGAATTCCCTCCTTATCCTGGATCTTAGCCTTCACATTC 178027 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||| | || || |||| |||||||| || || || || ||||| || Sbjct 178028 TCGATGGTGTCGGAGGCCTCGACCTCGAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACG 178087 Query 43173 AAGATTTGCAT 43183 ||||||||||| Sbjct 178088 AAGATTTGCAT 178098 >seq328 Length=524925 Score = 105 bits (116), Expect = 8e-18 Identities = 70/77 (91%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | ||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 365355 AAAAAATCTCTCC--GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGGGATAC 365412 Query 60117 TCACCACTATACTACCG 60133 | ||||||||||||||| Sbjct 365413 TAACCACTATACTACCG 365429 >seq38 Length=2624962 Score = 105 bits (116), Expect = 8e-18 Identities = 70/77 (91%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | ||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2571075 AAAAAATCTCTCC--GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGGGATAC 2571132 Query 60117 TCACCACTATACTACCG 60133 | ||||||||||||||| Sbjct 2571133 TGACCACTATACTACCG 2571149 >seq88 Length=1565181 Score = 98.7 bits (108), Expect = 1e-15 Identities = 70/78 (90%), Gaps = 3/78 (4%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | ||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 187957 AAAAAATCTCTCC--GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGGGATAC 188014 Query 60117 TCA-CCACTATACTACCG 60133 | | |||||||||||||| Sbjct 188015 TAATCCACTATACTACCG 188032 >seq98 Length=1573618 Score = 95.1 bits (104), Expect = 1e-14 Identities = 69/78 (88%), Gaps = 3/78 (4%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | ||||| |||||||| |||||||||||||||||||||||||||||| |||| Sbjct 118094 AAAAAATCTCTCC--GGCAGGGATTCGAACCCTGGTCTCCCGCGTGACAGGCGGGGATAC 118037 Query 60117 TCACC-ACTATACTACCG 60133 | ||| |||||||||||| Sbjct 118036 TGACCAACTATACTACCG 118019 Score = 95.1 bits (104), Expect = 1e-14 Identities = 69/78 (88%), Gaps = 3/78 (4%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | ||||| |||||||| |||||||||||||||||||||||||||||| |||| Sbjct 118501 AAAAAATCTCTCC--GGCAGGGATTCGAACCCTGGTCTCCCGCGTGACAGGCGGGGATAC 118444 Query 60117 TCACC-ACTATACTACCG 60133 | ||| |||||||||||| Sbjct 118443 TGACCAACTATACTACCG 118426 Score = 89.7 bits (98), Expect = 6e-13 Identities = 59/64 (92%), Gaps = 1/64 (2%) Strand=Plus/Minus Query 60071 CGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC-ACTATACT 60129 ||||||||| |||||||||||||||||||||||||||||| ||||| ||| |||||||| Sbjct 117677 CGGCAGGGATTCGAACCCTGGTCTCCCGCGTGACAGGCGGGGATACTGACCAACTATACT 117618 Query 60130 ACCG 60133 |||| Sbjct 117617 ACCG 117614 >seq10 Length=2352850 Score = 89.7 bits (98), Expect = 6e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| |||| ||| ||||||||||| ||||| || | || || || | || || Sbjct 819871 ACCAAGTGCAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAGAGGGTTCGGCCATCTTCC 819812 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | ||||||||||||||| || || || |||||||| | || | | ||| |||||| | Sbjct 819811 AACTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 819752 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || ||||| | | | ||||| | || || || | |||||||| || Sbjct 819751 ATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGATGGTCTTT 819692 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||| || ||||| ||||| Sbjct 819691 CCAGTCAACGTCTTCACGAAGATCTGCAT 819663 Score = 89.7 bits (98), Expect = 6e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| | ||||| ||||| || | ||| || || || || ||||| || | Sbjct 820346 TCCTCCTCTCAGACGCAGGACCAAGTGGAGTGTTGATTCTTTCTGGATGTTGTAGTCTGA 820287 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 |||||| | | || || || || ||||||||||| || | ||||||||||| | || Sbjct 820286 CAGAGTTCTGCCATCTTCCAGTTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGGGG 820227 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || |||||||||| ||| || |||| || | | |||||| | ||||| Sbjct 820226 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGTGTCAGATGCCTCCAC 820167 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || | ||||| || || || || | || || || || || |||||| Sbjct 820166 TTCAAGTGTGATAGTCTTACCAGTCAAAGTTTTCACGAAAATCTGCATT 820118 Score = 89.7 bits (98), Expect = 6e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||||| | ||| | || | ||| | ||| ||| || || ||||||||||||| Sbjct 820574 TCCTCCTCGAAGACGAAGAACAAGATGGAGAGTGGACTCTTTCTGGATATTGTAATCAGA 820515 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || | | | || || | ||| ||||||||||| || | ||||||||||| | || Sbjct 820514 GAGTGTTCTCCCATCCTCCAACTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGGGG 820455 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || |||||| ||| ||| || |||| | | | ||||| | ||| || Sbjct 820454 AATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCAGAGGCTTCGAC 820395 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || | ||||| || || ||||| || ||||| || || || |||||| Sbjct 820394 TTCTAGGGTGATCGTCTTTCCCGTGAGGGTCTTCACGAATATCTGCATT 820346 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||||| | ||| | || | ||| | ||| ||| || || ||||||||||||| Sbjct 821030 TCCTCCTCGAAGACGAAGAACAAGATGGAGAGTGGACTCTTTCTGGATATTGTAATCAGA 820971 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || | | | || || | || ||||||||||| || | ||||||||||| | || Sbjct 820970 GAGTGTTCTCCCATCCTCCAATTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGGGG 820911 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | ||| |||||| ||| || ||||| | | | ||||| | || || Sbjct 820910 AATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATAGTGTCAGAGGCCTCTAC 820851 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| || || || | |||||||||||||| ||||| Sbjct 820850 TTCCAGTGTGATGGTCTTCCCAGTCAATGTCTTTACAAAGATCTGCAT 820803 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || |||||||| ||||||| || || | | || || ||||||||||||||||| Sbjct 819626 CTCTTTCTGAATATTATAATCAGAAAGGGTTCTGCCATCCTCGAGCTGCTTACCAGCGAA 819567 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || || |||||||| | || | | ||| |||||| ||| || ||||| | Sbjct 819566 GATCAGACGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATT 819507 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| | || || || | |||||||| || || || | |||||| || Sbjct 819506 TTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGATGGTCTTTCCAGTCAACGTCTTCAC 819447 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 819446 GAAGATCTGCAT 819435 >seq103 Length=1377375 Score = 82.4 bits (90), Expect = 9e-11 Identities = 68/81 (84%), Gaps = 3/81 (4%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | ||||| ||| |||||| |||||| |||| |||||||||||||||| |||| Sbjct 945704 AAAAAATCTCTCC--GGCGGGGAATTGAACCCCGGTCGTCCGCGTGACAGGCGGAAATAC 945761 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||| ||||||||| || Sbjct 945762 T-ACCACTGTACTACCGAAGA 945781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571789237847040