Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq3879 87.8 6e-13 >seq3879 Length=3069 Score = 87.8 bits (96), Expect = 6e-13 Identities = 210/312 (67%), Gaps = 8/312 (3%) Strand=Plus/Plus Query 3719 GAGCCGATTGGCTACGACTGGTGGACCGGTGAAGGTGTCACGGCAAAACGCATTGCTGGC 3778 ||| ||||||| | |||||| | || ||||| |||| || ||||| |||| || | Sbjct 1587 GAGACGATTGGTCAAGACTGGG---CAGGCGAAGGGATCACTGCTAAACGAATTGGTG-C 1642 Query 3779 GCTCT-GCGCTCCATCGGCAACGATGTCGATGTGACCGTGAACATCAACAGCCCCGGCGG 3837 ||| ||| || | | || | | ||| | ||||| || ||||| || || || Sbjct 1643 AATCTTGCGTTCA--CAGGAAGG-TAAAGATATCACCGTCAATATCAATTCGCCGGGTGG 1699 Query 3838 CGACGTATTCGAAGGCCTGGCCATTTACAACCTGCTGCGCGAGCACAAGGGCAAGGTCAC 3897 ||| | || || || || | || ||||| | ||| || || || ||||| || || Sbjct 1700 CGATCTGTTTGAGGGGTTGACTATCTACAATCAGCTACGTGAATACGCTGGCAAAGTGAC 1759 Query 3898 GGTGAACATCATCGGCCTGGCTGCCTCTGCCGCCTCTTTCATCGCCATGGCGGGGGATGA 3957 ||||| || | || | || || || || || || |||| |||||| | || ||||| Sbjct 1760 CGTGAAAATAGTGGGGTTAGCGGCTTCCGCGGCTTCAATCATTGCCATGTCAGGCGATGA 1819 Query 3958 AATCCGCATCGGCCGCGCCGCCTTCCTGATGATCCATAACGCCTGGCTGATCGCCATGGG 4017 || | ||||| ||| || |||||||||||||| ||| ||||| || || | || Sbjct 1820 GATACAAATCGGGCGCAGTGCTTTCCTGATGATCCACAACACCTGGGGTATGGCAGTTGG 1879 Query 4018 TAATCGGAATGA 4029 ||||| |||| Sbjct 1880 CAATCGACATGA 1891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180433097591808