Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_002667.1 Length=41834 Score E Sequences producing significant alignments: (Bits) Value seq2452 134 4e-27 >seq2452 Length=2364 Score = 134 bits (148), Expect = 4e-27 Identities = 206/287 (72%), Gaps = 9/287 (3%) Strand=Plus/Plus Query 6345 TGGAGAGTTCAACAATCAGGATTTTCTAAACAAGGGAAACCTTGGGCTATGGTTCTTGCT 6404 ||| | ||||| | || ||| | || |||||| || |||||||| ||||||||||| Sbjct 1194 TGGCGCGTTCAGCGATGCGGAATATC-AAACAAC--AACCCTTGGGCAATGGTTCTTGCC 1250 Query 6405 TATATGGATAATCGGGCAGTTCAAG-AACGTTTTGATGAAGTTTTTGGAATTGCCGGATG 6463 ||| | ||| ||||| ||| | |||| | || || |||| ||||| | || Sbjct 1251 TATGTAACTAACCGGGC-CATCATGAAACGACTGGACGACGTTTGTGGAAAAGAGAATTG 1309 Query 6464 GAAGAACGAATTCAAAACAGCTCCAGATGGCGGGACGTTA--TGTGGTATATCCGTTAAG 6521 ||| || |||||| | | || |||||||| ||||| ||||| |||||| || Sbjct 1310 GAAAAATGAATTCTCTCCCGGACCTGATGGCGG--CGTTATGTGTGGCATATCCATTCGT 1367 Query 6522 TTTGGAGACGAATGGGTAACCAAATGGGATGGCGCAGAAAATACTCAGGTTGAAGCAGTT 6581 || | || || |||||||| || ||||| |||||||| || || ||||| || || ||| Sbjct 1368 ATTCGTGATGAGTGGGTAACGAAGTGGGACGGCGCAGATAAAACACAGGTGGAGGCGGTT 1427 Query 6582 AAAGGTGGGTTATCTGGATCAATGAAGAGAGCAGCTGTCCAATGGGG 6628 || ||||| | ||||| ||||||||| | || ||||| || ||||| Sbjct 1428 AAGGGTGGTATGTCTGGCTCAATGAAGCGCGCTGCTGTTCAGTGGGG 1474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133740897831936