Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq91 95.1 3e-14 >seq91 Length=1800720 Score = 95.1 bits (104), Expect = 3e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 ||||| || ||||| | || || |||||||||| |||| |||||| || || || Sbjct 269357 TGTCCCCCCTTCAAAATAGTAATTTTGGACGAGGCTGACAGCATGACCCACGCAGCTCAA 269298 Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321 || ||||| || ||||||||||||| | ||| || ||||| || || | ||| Sbjct 269297 TCAGCCCTTCGTCGAACGATGGAGAAAGAGTCCCACAGCACTCGTTTCTGTCTCATCTGC 269238 Query 254322 AACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAGC 254381 |||||||| |||| |||||||| || ||| | || || ||| | || || | |||| Sbjct 269237 AACTACGTCTCGAGGATCATCGAGCCCCTGACGTCGCGTTGCACTAAATTCAGGTTCAAG 269178 Query 254382 ACCCTCGCGC 254391 |||||| || Sbjct 269177 CCCCTCGGGC 269168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073711809716224