Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq88 104 2e-17 >seq88 Length=1565181 Score = 104 bits (114), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 21002 GTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCC 21061 ||| || | || |||||||| || | |||| ||||||||| || || ||||||||||| Sbjct 328619 GTGTGCCAGCATATACGTCAACAGTGAGTAGGAGGCGATGTTGAAGGGCACCCCGAGGCC 328678 Query 21062 CATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTG 21121 |||||| ||| | |||||||| || ||||| ||||| || ||| ||| | ||||| Sbjct 328679 CATGTCTGCGCTTCGTTGGTACAGGTGACAGGAGAGCTCTCCGTCAGCAACGAAGAACTG 328738 Query 21122 ACACAAAAC-GTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGC 21180 || | | ||| || || || |||||||| | | ||| || |||||||| |||| Sbjct 328739 -GACGAGGCAGTGGCAGGGTGGAAGAGCCATTTTGGGAATGTCTGCTGGGTTCCAGGCGC 328797 Query 21181 ACATAACGATGCGCCGATCGT 21201 | || | ||| | || |||| Sbjct 328798 AGATTATGATCCTTCGGTCGT 328818 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 21280 TGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGC 21339 |||||| || ||| | ||||||||||| ||||| || | ||||| ||||| ||||| Sbjct 328991 TGTACTTGGCACCAGAGTGTCTCCACTGAAACCCATAGATTGGCCCTAGATCACCCTCCT 329050 Query 21340 GGCGGTCCCCGAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTT 21399 |||||| |||||| | || |||| | | || || | || |||||||| |||| Sbjct 329051 CACGGTCCTTGAAGCCGTAAGCATCCAAGTATTCACGTGAGCTGTTGGCGTCCCAGATTT 329110 Query 21400 TTACGCCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACT 21459 | || || || || | |||| || || ||||| || ||||| ||||| || | | Sbjct 329111 TCACTCCTCGCTTTGATAATTCGTGGGCGTTTGTGGATCCACTGATGAACCAGAGGAGTT 329170 Query 21460 CCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGT 21496 | ||||| || ||| |||| || ||| ||| ||||| Sbjct 329171 CTTCCACTACTCCCTTCCAGAAGACCGATTTCGTGGT 329207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427755312752640