Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_004066.1 Length=36798 Score E Sequences producing significant alignments: (Bits) Value seq2452 122 2e-23 >seq2452 Length=2364 Score = 122 bits (134), Expect = 2e-23 Identities = 201/286 (70%), Gaps = 7/286 (2%) Strand=Plus/Plus Query 7596 TGGAGAGTTCAACAATCAGGATTTTCTAAACAAGGTAAACCTTGGGCTATGGTTCTTGCT 7655 ||| | ||||| | || ||| | || |||||| || |||||||| ||||||||||| Sbjct 1194 TGGCGCGTTCAGCGATGCGGAATATC-AAACAAC--AACCCTTGGGCAATGGTTCTTGCC 1250 Query 7656 TATATGGATAATCGGGCAGTCCAAGAACGTTTTGATGAAGTTTTTGGAATTGCCGGATGG 7715 ||| | ||| ||||| || |||| | || || |||| ||||| | ||| Sbjct 1251 TATGTAACTAACCGGGCCATCATGAAACGACTGGACGACGTTTGTGGAAAAGAGAATTGG 1310 Query 7716 AAGAACGAATTCAAAACAGCTCCAGATGGTGGAACATTA--TGTGGTATATCCGTTAAGT 7773 || || |||||| | | || ||||| || | ||| ||||| |||||| || Sbjct 1311 AAAAATGAATTCTCTCCCGGACCTGATGGCGG--CGTTATGTGTGGCATATCCATTCGTA 1368 Query 7774 TTGGAGACGAATGGGTCACCAAATGGGATGGCGCAGAAAATACTCAGGTTGAAGCAGTTA 7833 || | || || ||||| || || ||||| |||||||| || || ||||| || || |||| Sbjct 1369 TTCGTGATGAGTGGGTAACGAAGTGGGACGGCGCAGATAAAACACAGGTGGAGGCGGTTA 1428 Query 7834 AAGGTGGATTATCTGGATCAATGAAGAGAGCAGCTGTCCAATGGGG 7879 | ||||| | ||||| ||||||||| | || ||||| || ||||| Sbjct 1429 AGGGTGGTATGTCTGGCTCAATGAAGCGCGCTGCTGTTCAGTGGGG 1474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117626457180160