Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_004688.1 Length=110865 Score E Sequences producing significant alignments: (Bits) Value seq2642 118 8e-22 >seq2642 Length=19944 Score = 118 bits (130), Expect = 8e-22 Identities = 129/171 (75%), Gaps = 3/171 (2%) Strand=Plus/Minus Query 99393 CTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAAT 99452 |||||| ||||| || | ||||||||||| ||||||||||||||||| || || || || Sbjct 14620 CTTGATAAGGCCAGTGATAACATCCACGGAAGGCCGCTGCGTCGCCAGCACCAGGTGGAT 14561 Query 99453 GCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTTCTTGTA 99512 |||||||| ||||| |||||||| | ||| | | | ||| || |||| ||| Sbjct 14560 ACCGGCCGCGCGCGCTTTCTGCGCAAGGCG---AGCGATCAGCTCTTCCACTTTTTTGCC 14504 Query 99513 GCCACCCATCATGAGATCAGCGAGTTCATCCACCACTACCACGATGTAGGG 99563 | ||||||| ||||| || | ||||||||||| |||||||| |||| Sbjct 14503 AACCGCCATCATCAGATCGGCAAATTCATCCACCATCACCACGATAAAGGG 14453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354626049454848