Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq14 95.1 1e-14 >seq14 Length=2234412 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || || || || || | |||| ||| | || || ||||| ||||| |||||||| | | Sbjct 1933624 CCACCACGTAATCTGAGTACCAAGTGAAGTGTCGATTCCTTCTGAATGTTGTAATCAGAC 1933565 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | || | ||||| ||||||||||| || |||| || |||||||| || ||| Sbjct 1933564 AGGGTGCGTCCATCCTCGAGCTGTTTACCAGCGAAAATCAGCCTCTGCTGGTCTGGGGGA 1933505 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | |||||| ||||| |||||| ||| || | ||| || || || |||| Sbjct 1933504 ATGCCCTCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATTGTGTCAGAAGCCTCCACC 1933445 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 |||| ||| ||||| || || |||| ||||| || || || ||||| || Sbjct 1933444 TCGAGGGTGATGGTCTTCCCAGTTAGGGTTTTTACGAAGATCTGCATGTT 1933395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414552751259392