Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq10 91.5 1e-13 >seq10 Length=2352850 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||||||||| | | | || | ||| || || || |||||||| |||||||| || Sbjct 820119 TTCCTCCTCGAAGACGAAGAACGAGATGGAGGGTGGACTCTTTTTGAATGTTGTAGTCTG 820060 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | |||| | || ||||||||||| || || | || | | ||||||||| | Sbjct 820059 AAAGAGTTCTTCCGTCCTCCAATTGTTTACCAGCGAAGATCAAACGCTGTTGATCTGGTG 820000 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | |||||||| || |||||| ||| || | ||| || || | ||| Sbjct 819999 GGATACCTTCTTTATCTTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGATGCTTCGA 819940 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| ||| ||||||||||| ||||| || || |||||||| |||||| Sbjct 819939 CTTCCAGGGTGATGGTTTTGCCAGTCAATGTCTTAACAAAAATCTGCATT 819890 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 ||||| || |||||||||||||| || |||||||| ||| || |||| || ||||||| Sbjct 821239 ACCAAGTGGAGTGTAGATTCTTTCTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 821180 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | |||||| || ||| | || | | ||||||||| || | ||| || ||||| Sbjct 821179 AGTTGTTTACCAGCAAAGATCAAACGCTGTTGATCTGGAGGAATGCCCTCCTTGTCCTGG 821120 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 ||||| || || | ||| | || | || ||| | || ||||| ||| Sbjct 821119 ATTTTGGCCTTGACGTTTTCAATTGTGTCAGAGGCCTCTACTTCGAGTGTGATGGTCTTG 821060 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || || | |||||||| ||||| |||||| Sbjct 821059 CCAGTTAGGGTTTTGACGAAAATCTGCATT 821030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419566908763008