Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq10 159 8e-34 seq676 158 3e-33 seq29 143 6e-29 >seq10 Length=2352850 Score = 159 bits (176), Expect = 8e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || | ||| || | || | ||||||||||||||| || || ||||| || Sbjct 821257 CCACCTCTGAGACGAAGAACCAAGTGGAGTGTAGATTCTTTCTGGATGTTGTAGTCGGAC 821198 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | ||||||||| ||||| |||||||| |||||||| || | | ||||||||| ||||| Sbjct 821197 AAAGTTCTACCATCTTCCAGTTGTTTACCAGCAAAGATCAAACGCTGTTGATCTGGAGGA 821138 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || || || || ||||| || || || || || ||||| | || || | ||||| Sbjct 821137 ATGCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGAGGCCTCTACT 821078 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || ||||| || ||||| ||||| || ||||| || || ||||||||| Sbjct 821077 TCGAGTGTGATGGTCTTGCCAGTTAGGGTTTTGACGAAAATCTGCATT 821030 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | ||| || ||||| | || || ||||| ||||| || ||||| Sbjct 820120 ATTCCTCCTCGAAGACGAAGAACGAGATGGAGGGTGGACTCTTTTTGAATGTTGTAGTCT 820061 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| ||||| || | |||||| ||||| || || | | ||||||||| || Sbjct 820060 GAAAGAGTTCTTCCGTCCTCCAATTGTTTACCAGCGAAGATCAAACGCTGTTGATCTGGT 820001 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||||||||| ||||| || ||||| |||||||| | || || | ||| Sbjct 820000 GGGATACCTTCTTTATCTTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGATGCTTCG 819941 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || || || ||||| | ||| || ||||| ||||||||| Sbjct 819940 ACTTCCAGGGTGATGGTTTTGCCAGTCAATGTCTTAACAAAAATCTGCATT 819890 Score = 141 bits (156), Expect = 2e-28 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| || || ||||| || ||||| || || ||||| | |||||| ||| Sbjct 820771 GTGGATTCCTTCTGGATGTTGTAGTCTGAGAGAGTCCTGCCATCTTCCAATTGTTTACCA 820712 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||||| || ||||| ||||| ||||||||||| ||||| || || Sbjct 820711 GCGAAGATGAGACGTTGTTGGTCTGGAGGAATTCCCTCTTTATCCTGGATCTTCGCCTTG 820652 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || ||||| | || || | ||||| || ||||| || ||||| ||||| || || Sbjct 820651 ACGTTTTCAATTGTGTCAGAGGCCTCTACTTCGAGTGTGATGGTCTTGCCAGTCAGAGTC 820592 Query 104543 TTTACAAATATCTGCATT 104560 || ||||| ||||||||| Sbjct 820591 TTGACAAAAATCTGCATT 820574 Score = 140 bits (154), Expect = 7e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | || || || || | || || ||||||||||||||||| ||| Sbjct 818980 ATGCCACCTCGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCA 818921 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || || || || || || ||||| || || || | || || || ||| Sbjct 818920 GAAAGGGTTCTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGA 818861 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| ||||| ||||| ||||| ||||| |||||||| | || || || || Sbjct 818860 GGGATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAAGCCTCA 818801 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | ||||| ||||| ||||| | ||||| || || |||||||| Sbjct 818800 ACCTCCAACGTAATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 818751 Score = 138 bits (152), Expect = 3e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| || | || || | || | ||| ||||||||||| || || ||||| Sbjct 820348 ATTCCTCCTCTCAGACGCAGGACCAAGTGGAGTGTTGATTCTTTCTGGATGTTGTAGTCT 820289 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| || ||||| |||||||| ||||| || || | | ||| || || || Sbjct 820288 GACAGAGTTCTGCCATCTTCCAGTTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGG 820229 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || || ||||| ||||| || || || || || | || || | || Sbjct 820228 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGTGTCAGATGCCTCC 820169 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || ||||| |||||||||||||| | ||||| || || ||||||||| Sbjct 820168 ACTTCAAGTGTGATAGTCTTACCAGTCAAAGTTTTCACGAAAATCTGCATT 820118 Score = 138 bits (152), Expect = 3e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | ||| || ||||| | || || |||||||| ||||| || ||| Sbjct 820576 ATTCCTCCTCGAAGACGAAGAACAAGATGGAGAGTGGACTCTTTCTGGATATTGTAATCA 820517 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || || || | ||||| ||||| || || | | ||| || || || Sbjct 820516 GAGAGTGTTCTCCCATCCTCCAACTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGG 820457 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || |||||||| ||||| || || |||||||| | ||| || | ||| Sbjct 820456 GGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCAGAGGCTTCG 820397 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || ||||| || || ||||| || || || || || || |||||||||||| Sbjct 820396 ACTTCTAGGGTGATCGTCTTTCCCGTGAGGGTCTTCACGAATATCTGCATT 820346 Score = 131 bits (144), Expect = 4e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | || || || || | || || ||||||||||||||||| ||| Sbjct 819664 ATGCCACCTCGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCA 819605 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || || || || || || ||||| || || || | || || || ||| Sbjct 819604 GAAAGGGTTCTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGA 819545 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| ||||| ||||| ||||| ||||| |||||||| | || || | || Sbjct 819544 GGGATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCG 819485 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| ||||| | || || || || |||||||| Sbjct 819484 ACCTCCAGGGTGATGGTCTTTCCAGTCAACGTCTTCACGAAGATCTGCAT 819435 Score = 127 bits (140), Expect = 5e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | || || || || | || || ||||||||||||||||| ||| Sbjct 819208 ATGCCACCTCGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCA 819149 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || || || || || || ||||| || || | | || || || ||| Sbjct 819148 GAAAGGGTTCTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGCTGGTCTGGA 819089 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| ||||| ||||| ||||| ||||| |||||||| | || || | || Sbjct 819088 GGGATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCG 819029 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| ||||| | || || || || |||||||| Sbjct 819028 ACCTCCAGGGTGATGGTCTTTCCAGTCAACGTCTTCACGAAGATCTGCAT 818979 Score = 127 bits (140), Expect = 5e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | || || || || | || || ||||||||||||||||| ||| Sbjct 819436 ATGCCACCTCGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCA 819377 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || || || || || || ||||| || || | | || || || ||| Sbjct 819376 GAAAGGGTTCTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGCTGGTCTGGA 819317 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| ||||| ||||| ||||| ||||| |||||||| | || || | || Sbjct 819316 GGGATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCG 819257 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| ||||| | || || || || |||||||| Sbjct 819256 ACCTCCAGGGTGATGGTCTTTCCAGTCAACGTCTTCACGAAGATCTGCAT 819207 >seq676 Length=265522 Score = 158 bits (174), Expect = 3e-33 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| ||||| || || || ||||| ||||| | ||||||||| | |||||||||| Sbjct 178358 GTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCGTCTTCCAATTGTTTTCCA 178417 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || ||||| || || || || ||||| || |||||||| |||||||| || Sbjct 178418 GCGAAGATCAGTCTCTGCTGGTCTGGGGGAATTCCCTCCTTATCCTGGATCTTTGCCTTC 178477 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | |||||| | || ||||| || || || ||||| || || || ||| Sbjct 178478 ACGTTCTCGATGGTATCAGAGGCCTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGCGTT 178537 Query 104543 TTTACAAATATCTGCATTTT 104562 || || |||||||||||||| Sbjct 178538 TTCACGAATATCTGCATTTT 178557 >seq29 Length=2726036 Score = 143 bits (158), Expect = 6e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 ||||| || || |||||||| ||||| | || || |||| |||||||||||| || || Sbjct 1034236 TTCTGGATGTTGTAGTCAGAGAGAGTACGGCCATCCTCTAATTGTTTTCCAGCGAAGATC 1034177 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491 | |||||| || || ||||| || || || |||||||||||||| ||||| |||||||| Sbjct 1034176 AACCTCTGCTGGTCTGGAGGAATGCCCTCCTTATCCTGAATCTTGGCTTTGACATTTTCG 1034117 Query 104492 ACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAAT 104551 | ||||| || || ||||| || || || ||||| || || | ||| || || || Sbjct 1034116 ATCGTATCAGAAGCCTCAACCTCAAGGGTGATGGTCTTCCCCGTCAATGTCTTGACGAAA 1034057 Query 104552 ATCTGCATTTTG 104563 ||||||||| || Sbjct 1034056 ATCTGCATTGTG 1034045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151339862905344